GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
ARATH:DNAT1
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | DHNAT1 (ECO:0000303 with PMID:22372525[1]) | |
| Protein Name(s) | 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 (ECO:0000303 with PMID:22372525[1])
AtDHNAT1 (ECO:0000303 with PMID:22372525[1]) DHNA-CoA thioesterase 1 (ECO:0000303 with PMID:22372525[1]) | |
| External Links | ||
| UniProt | Q9SX65 | |
| EMBL | AC007932 CP002684 BT010185 AK229541 | |
| PIR | B96523 | |
| RefSeq | NP_175266.1 | |
| UniGene | At.38444 At.64445 | |
| PDB | 4K02 | |
| PDBsum | 4K02 | |
| ProteinModelPortal | Q9SX65 | |
| SMR | Q9SX65 | |
| IntAct | Q9SX65 | |
| STRING | 3702.AT1G48320.1 | |
| PaxDb | Q9SX65 | |
| EnsemblPlants | AT1G48320.1 | |
| GeneID | 841252 | |
| Gramene | AT1G48320.1 | |
| KEGG | ath:AT1G48320 | |
| Araport | AT1G48320 | |
| TAIR | locus:2007735 | |
| eggNOG | KOG3328 COG2050 | |
| HOGENOM | HOG000066991 | |
| OMA | HFRSAKV | |
| OrthoDB | EOG09360R2Y | |
| PhylomeDB | Q9SX65 | |
| UniPathway | UPA00995 UPA01057 | |
| PRO | PR:Q9SX65 | |
| Proteomes | UP000006548 | |
| ExpressionAtlas | Q9SX65 | |
| Genevisible | Q9SX65 | |
| GO | GO:0005777 GO:0016787 GO:0042372 GO:0051289 | |
| InterPro | IPR029069 IPR003736 IPR006683 | |
| Pfam | PF03061 | |
| SUPFAM | SSF54637 | |
| TIGRFAMs | TIGR00369 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0005777 |
peroxisome |
ECO:0000314 |
C |
AtDHNAT1 in A. thaliana; has two splice variants including At5g48950.1 (no separate UniProt ID). As predicted, the C-terminal part of At5g48950.1 could target GFP to peroxisomes (Fig. 3b), shown through GFP reporter assay |
complete | |||||
| GO:0005777 |
peroxisome |
ECO:0000314 |
C |
AtDHNAT1 in A. thaliana; has two splice variants including At3g50170.1 (no separate UniProt ID). The C-terminal part of At3g50170.1 could target GFP to peroxisomes (Fig. 5b), shown with GFP reporter assay |
complete | |||||
|
involved_in |
GO:0051289 |
protein homotetramerization |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042372 |
phylloquinone biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005777 |
peroxisome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0061522 |
1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG13968 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0042372 |
phylloquinone biosynthetic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000965045 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0016289 |
CoA hydrolase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11105 |
F |
Seeded From UniProt |
complete | ||
|
NOT|part_of |
GO:0005829 |
cytosol |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000965045 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005777 |
peroxisome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000965045 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005777 |
peroxisome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042372 |
phylloquinone biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00995 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Widhalm, JR et al. (2012) Phylloquinone (vitamin K(1) ) biosynthesis in plants: two peroxisomal thioesterases of Lactobacillales origin hydrolyze 1,4-dihydroxy-2-naphthoyl-CoA. Plant J. 71 205-15 PubMed GONUTS page
- ↑ 2.0 2.1 An, C et al. (2017) Alternative splicing affects the targeting sequence of peroxisome proteins in Arabidopsis. Plant Cell Rep. PubMed GONUTS page
- ↑ Furt, F et al. (2013) Functional convergence of structurally distinct thioesterases from cyanobacteria and plants involved in phylloquinone biosynthesis. Acta Crystallogr. D Biol. Crystallogr. 69 1876-88 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 4.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
