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ARATH:DAPB1
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | DAPB1 | |
| Protein Name(s) | 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic
HTPA reductase 1 | |
| External Links | ||
| UniProt | O80574 | |
| EMBL | AC004005 CP002685 BT008540 AY084299 AK118845 | |
| PIR | T00684 | |
| RefSeq | NP_566006.1 | |
| UniGene | At.36804 | |
| ProteinModelPortal | O80574 | |
| SMR | O80574 | |
| BioGrid | 4345 | |
| IntAct | O80574 | |
| STRING | 3702.AT2G44040.1-P | |
| PaxDb | O80574 | |
| PRIDE | O80574 | |
| EnsemblPlants | AT2G44040.1 | |
| GeneID | 819009 | |
| KEGG | ath:AT2G44040 | |
| TAIR | AT2G44040 | |
| eggNOG | COG0289 | |
| HOGENOM | HOG000265601 | |
| InParanoid | O80574 | |
| KO | K00215 | |
| OMA | LEMHHKF | |
| PhylomeDB | O80574 | |
| BioCyc | ARA:AT2G44040-MONOMER | |
| UniPathway | UPA00034 | |
| Proteomes | UP000006548 | |
| Genevestigator | O80574 | |
| GO | GO:0009507 GO:0009570 GO:0008839 GO:0070402 GO:0019877 GO:0009089 | |
| Gene3D | 3.40.50.720 | |
| InterPro | IPR022663 IPR000846 IPR011770 IPR011859 IPR016040 | |
| PANTHER | PTHR20836 | |
| Pfam | PF05173 PF01113 | |
| TIGRFAMs | TIGR02130 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0008839 |
4-hydroxy-tetrahydrodipicolinate reductase |
ECO:0000314 |
F |
table 1 |
complete | |||||
|
enables |
GO:0008839 |
4-hydroxy-tetrahydrodipicolinate reductase |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009570 |
chloroplast stroma |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009507 |
chloroplast |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0019877 |
diaminopimelate biosynthetic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10206 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0009570 |
chloroplast stroma |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000464620 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0008839 |
4-hydroxy-tetrahydrodipicolinate reductase |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10206 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0008839 |
4-hydroxy-tetrahydrodipicolinate reductase |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000846 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009089 |
lysine biosynthetic process via diaminopimelate |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000846 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0055114 |
oxidation-reduction process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000846 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0070402 |
NADPH binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008839 |
4-hydroxy-tetrahydrodipicolinate reductase |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008652 |
cellular amino acid biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0055114 |
oxidation-reduction process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0019877 |
diaminopimelate biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009507 |
chloroplast |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009536 |
plastid |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009085 |
lysine biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016491 |
oxidoreductase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009089 |
lysine biosynthetic process via diaminopimelate |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00034 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Griffin, MD et al. (2012) Characterisation of the first enzymes committed to lysine biosynthesis in Arabidopsis thaliana. PLoS ONE 7 e40318 PubMed GONUTS page
- ↑ Ferro, M et al. (2010) AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Mol. Cell Proteomics 9 1063-84 PubMed GONUTS page
- ↑ Zybailov, B et al. (2008) Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. PLoS ONE 3 e1994 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
