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ARATH:CYP40
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | CYP40 (synonyms: SQN) | |
| Protein Name(s) | Peptidyl-prolyl cis-trans isomerase CYP40
PPIase CYP40 Cyclophilin of 40 kDa Cyclophilin-40 Protein SQUINT Rotamase CYP40 | |
| External Links | ||
| UniProt | Q9C566 | |
| EMBL | AY026065 AC006438 CP002685 BT028999 | |
| PIR | D84533 | |
| RefSeq | NP_565381.1 | |
| UniGene | At.13863 | |
| ProteinModelPortal | Q9C566 | |
| SMR | Q9C566 | |
| BioGrid | 1433 | |
| IntAct | Q9C566 | |
| MINT | MINT-8375558 | |
| PaxDb | Q9C566 | |
| PRIDE | Q9C566 | |
| EnsemblPlants | AT2G15790.1 | |
| GeneID | 816074 | |
| KEGG | ath:AT2G15790 | |
| TAIR | AT2G15790 | |
| eggNOG | COG0652 | |
| HOGENOM | HOG000065980 | |
| InParanoid | Q9C566 | |
| KO | K05864 | |
| OMA | ARIVECG | |
| PhylomeDB | Q9C566 | |
| BioCyc | ARA:AT2G15790-MONOMER | |
| PRO | PR:Q9C566 | |
| Proteomes | UP000006548 | |
| ExpressionAtlas | Q9C566 | |
| Genevestigator | Q9C566 | |
| GO | GO:0005737 GO:0005829 GO:0042277 GO:0003755 GO:0010582 GO:0006457 GO:0010050 | |
| Gene3D | 1.25.40.10 2.40.100.10 | |
| InterPro | IPR029000 IPR020892 IPR002130 IPR013026 IPR011990 IPR013105 IPR019734 | |
| Pfam | PF00160 PF07719 | |
| PRINTS | PR00153 | |
| SUPFAM | SSF50891 | |
| PROSITE | PS00170 PS50072 PS50005 PS50293 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0010582 |
floral meristem determinacy |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
AGI_LocusCode:AT1G69180 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0010050 |
vegetative phase change |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003755 |
peptidyl-prolyl cis-trans isomerase activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
Missing: with/from | |||
|
enables |
GO:0051082 |
unfolded protein binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002594282 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0042026 |
protein refolding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002594282 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0016018 |
cyclosporin A binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0002936 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003755 |
peptidyl-prolyl cis-trans isomerase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0039581 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003755 |
peptidyl-prolyl cis-trans isomerase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0039581 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000413 |
protein peptidyl-prolyl isomerization |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003755 |
peptidyl-prolyl cis-trans isomerase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006457 |
protein folding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003755 |
peptidyl-prolyl cis-trans isomerase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016853 |
isomerase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003755 |
peptidyl-prolyl cis-trans isomerase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Prunet, N et al. (2008) REBELOTE, SQUINT, and ULTRAPETALA1 function redundantly in the temporal regulation of floral meristem termination in Arabidopsis thaliana. Plant Cell 20 901-19 PubMed GONUTS page
- ↑ 2.0 2.1 Berardini, TZ et al. (2001) Regulation of vegetative phase change in Arabidopsis thaliana by cyclophilin 40. Science 291 2405-7 PubMed GONUTS page
- ↑ Ito, J et al. (2011) Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. J. Proteome Res. 10 1571-82 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 4.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
