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ARATH:CRYD
Contents
Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
Gene Name(s) | CRYD (synonyms: CRY3) | |
Protein Name(s) | Cryptochrome DASH, chloroplastic/mitochondrial
Cryptochrome-3 | |
External Links | ||
UniProt | Q84KJ5 | |
EMBL | AF069716 CP002688 AY065032 AY102138 AB062926 | |
RefSeq | NP_568461.3 | |
UniGene | At.19735 | |
PDB | 2IJG 2J4D 2VTB | |
PDBsum | 2IJG 2J4D 2VTB | |
ProteinModelPortal | Q84KJ5 | |
SMR | Q84KJ5 | |
BioGrid | 17829 | |
DIP | DIP-48661N | |
STRING | 3702.AT5G24850.1 | |
PaxDb | Q84KJ5 | |
PRIDE | Q84KJ5 | |
EnsemblPlants | AT5G24850.1 | |
GeneID | 832554 | |
Gramene | AT5G24850.1 | |
KEGG | ath:AT5G24850 | |
Araport | AT5G24850 | |
eggNOG | KOG0133 COG0415 | |
HOGENOM | HOG000245621 | |
InParanoid | Q84KJ5 | |
KO | K01669 | |
OMA | FLMECLV | |
OrthoDB | EOG093605E8 | |
PhylomeDB | Q84KJ5 | |
EvolutionaryTrace | Q84KJ5 | |
PRO | PR:Q84KJ5 | |
Proteomes | UP000006548 | |
ExpressionAtlas | Q84KJ5 | |
Genevisible | Q84KJ5 | |
GO | GO:0009507 GO:0005739 GO:0005524 GO:0003677 GO:0003913 GO:0009881 GO:0006281 GO:0018298 | |
Gene3D | 3.40.50.620 | |
InterPro | IPR014133 IPR036134 IPR036155 IPR005101 IPR002081 IPR006050 IPR014729 | |
Pfam | PF00875 PF03441 | |
PRINTS | PR00147 | |
SUPFAM | SSF48173 SSF52425 | |
TIGRFAMs | TIGR02765 | |
PROSITE | PS51645 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
enables |
GO:0003913 |
DNA photolyase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
GO:0000719 |
photoreactive repair |
ECO:0000315 |
P |
Figure 5 compares the repair rates of Arabidopsis thaliana in relation to cry3/CRYD/Cryptochrome DASH/ chloroplastic/mitochondrial and its mutant when exposed to light in various amounts after UV treatment. |
complete | |||||
involved_in |
GO:0006281 |
DNA repair |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0009881 |
photoreceptor activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050896 |
response to stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0009507 |
chloroplast |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0018298 |
protein-chromophore linkage |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0009536 |
plastid |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005739 |
mitochondrion |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Pokorny, R et al. (2008) Recognition and repair of UV lesions in loop structures of duplex DNA by DASH-type cryptochrome. Proc. Natl. Acad. Sci. U.S.A. 105 21023-7 PubMed GONUTS page