GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
ARATH:BOB1
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | BOB1 | |
| Protein Name(s) | Protein BOBBER 1 | |
| External Links | ||
| UniProt | Q9LV09 | |
| EMBL | AB020754 CP002688 BT003074 AK227305 AY087741 | |
| RefSeq | NP_200152.1 | |
| UniGene | At.27931 | |
| ProteinModelPortal | Q9LV09 | |
| SMR | Q9LV09 | |
| BioGrid | 20666 | |
| IntAct | Q9LV09 | |
| STRING | 3702.AT5G53400.1 | |
| PaxDb | Q9LV09 | |
| PRIDE | Q9LV09 | |
| EnsemblPlants | [example_ID AT5G53400.1] | |
| GeneID | 835421 | |
| Gramene | AT5G53400.1 | |
| KEGG | ath:AT5G53400 | |
| TAIR | AT5G53400 | |
| eggNOG | KOG2265 ENOG410XQVU | |
| HOGENOM | HOG000182245 | |
| InParanoid | Q9LV09 | |
| OMA | KAMNFCP | |
| PhylomeDB | Q9LV09 | |
| PRO | PR:Q9LV09 | |
| Proteomes | UP000006548 | |
| Genevisible | Q9LV09 | |
| GO | GO:0005737 GO:0005829 GO:0032502 GO:0009880 GO:0010286 GO:0010450 GO:0009965 GO:0009555 GO:0006457 GO:0009735 GO:0009408 GO:0048833 GO:0048448 | |
| Gene3D | 2.60.40.790 | |
| InterPro | IPR007052 IPR008978 | |
| Pfam | PF04969 | |
| SUPFAM | SSF49764 | |
| PROSITE | PS51203 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0010286 |
heat acclimation |
ECO:0000315 |
P |
Figure 5 shows the partial loss of function mutant bob1-3 is less thermotolerant than the wild-type Col-0 in term of germinating after a heat shock. |
complete | |||||
| GO:0048461 |
flower structural organization |
ECO:0000315 |
P |
Figure 2d shows the partial loss of function mutant bob1-3 causes flowers that have more sepals, petals, and carpels and fewer stamens than wild type flowers |
complete | |||||
|
involved_in |
GO:0010286 |
heat acclimation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0048833 |
specification of floral organ number |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0048448 |
stamen morphogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0032502 |
developmental process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010450 |
inflorescence meristem growth |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009965 |
leaf morphogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009880 |
embryonic pattern specification |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009735 |
response to cytokinin |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009555 |
pollen development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009408 |
response to heat |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009408 |
response to heat |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006457 |
protein folding |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0051082 |
unfolded protein binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000270240 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0032502 |
developmental process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000270240 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006457 |
protein folding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000270240 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0021768 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007275 |
multicellular organism development |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 1.12 Perez, DE et al. (2009) BOBBER1 is a noncanonical Arabidopsis small heat shock protein required for both development and thermotolerance. Plant Physiol. 151 241-52 PubMed GONUTS page
- ↑ Jurkuta, RJ et al. (2009) Partitioning the apical domain of the Arabidopsis embryo requires the BOBBER1 NudC domain protein. Plant Cell 21 1957-71 PubMed GONUTS page
- ↑ Černý, M et al. (2013) Proteome and metabolome profiling of cytokinin action in Arabidopsis identifying both distinct and similar responses to cytokinin down- and up-regulation. J. Exp. Bot. 64 4193-206 PubMed GONUTS page
- ↑ Ito, J et al. (2011) Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. J. Proteome Res. 10 1571-82 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 5.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
