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AQUAE:O67450
Contents
Species (Taxon ID) | Aquifex aeolicus (strain VF5). (224324) | |
Gene Name(s) | dnaB (ECO:0000313 with EMBL:AAC07414.1) | |
Protein Name(s) | Replicative DNA helicase (ECO:0000256 with RuleBase:RU362085) | |
External Links | ||
UniProt | O67450 | |
EMBL | AE000657 | |
PIR | H70427 | |
RefSeq | NP_214015.1 WP_010880953.1 | |
PDB | 4NMN | |
PDBsum | 4NMN | |
ProteinModelPortal | O67450 | |
STRING | 224324.aq_1472 | |
EnsemblBacteria | AAC07414 | |
GeneID | 1192981 | |
KEGG | aae:aq_1472 | |
PATRIC | 20960068 | |
eggNOG | ENOG4105CDU COG0305 | |
HOGENOM | HOG000113196 | |
InParanoid | O67450 | |
KO | K02314 | |
OMA | WHESFID | |
OrthoDB | EOG6T4RW5 | |
BioCyc | AAEO224324:GJBH-1056-MONOMER | |
Proteomes | UP000000798 | |
GO | GO:0005829 GO:1990077 GO:0005524 GO:0003677 GO:0003678 GO:0046872 GO:0006269 GO:0006268 | |
Gene3D | 1.10.860.10 3.40.50.300 | |
InterPro | IPR003593 IPR007692 IPR007694 IPR007693 IPR016136 IPR027417 | |
Pfam | PF00772 PF03796 | |
SMART | SM00382 | |
SUPFAM | SSF48024 SSF52540 | |
TIGRFAMs | TIGR00665 | |
PROSITE | PS51199 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0032508 |
DNA duplex unwinding |
ECO:0000315 |
P |
"When the dilated and constricted mutants were tested in a single-turnover, fork-unwinding assay with DnaC, the dilated mutant was able to produce ∼20% more unwound product as the wild-type helicase and did so at a slightly faster rate (Figure 5B). By contrast, while the constricted mutant could generate an amount of ssDNA comparable to that of wild-type DnaB, it took longer to do so (Figure 5B)." |
complete | |||||
involved_in |
GO:0006268 |
DNA unwinding involved in DNA replication |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10236 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005829 |
cytosol |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10236 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003678 |
DNA helicase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10236 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003678 |
DNA helicase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR007692 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR007692 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006260 |
DNA replication |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR007692 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:1990077 |
primosome complex |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006269 |
DNA replication, synthesis of RNA primer |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000166 |
nucleotide binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006260 |
DNA replication |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0004386 |
helicase activity |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:1990077 |
primosome complex |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000171759 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006269 |
DNA replication, synthesis of RNA primer |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000171759 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000171759 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000171759 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003678 |
DNA helicase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000171759 |
F |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Strycharska, MS et al. (2013) Nucleotide and partner-protein control of bacterial replicative helicase structure and function. Mol. Cell 52 844-54 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page