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AGRFC:A9CK68
Contents
| Species (Taxon ID) | Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacteriumtumefaciens (strain C58)). (176299) | |
| Gene Name(s) | flgE (ECO:0000313 with EMBL:AAK86385.1) | |
| Protein Name(s) | Flagellar hook protein FlgE (ECO:0000256 with RuleBase:RU362116) | |
| External Links | ||
| UniProt | A9CK68 | |
| EMBL | AE007869 | |
| PIR | AI2646 H97428 | |
| RefSeq | NP_353600.1 WP_010970985.1 | |
| ProteinModelPortal | A9CK68 | |
| STRING | 176299.Atu0574 | |
| EnsemblBacteria | AAK86385 | |
| GeneID | 1132612 | |
| KEGG | atu:Atu0574 | |
| PATRIC | 20810849 | |
| eggNOG | ENOG4105BZE COG1749 | |
| HOGENOM | HOG000254240 | |
| KO | K02390 | |
| OrthoDB | EOG6G7R1D | |
| BioCyc | AGRO:ATU0574-MONOMER | |
| Proteomes | UP000000813 | |
| GO | GO:0009425 GO:0071973 | |
| InterPro | IPR011491 IPR001444 IPR019776 IPR020013 IPR010930 | |
| Pfam | PF07559 PF00460 PF06429 | |
| TIGRFAMs | TIGR03506 | |
| PROSITE | PS00588 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
Contributes to |
GO:0009424 |
bacterial-type flagellum hook |
ECO:0000314 |
C |
Figure 1: This figure shows a 1bp gene in the flagellar hoot makes the organisms unable to swim properly. |
complete | ||||
|
Contributes to |
GO:0009424 |
bacterial-type flagellum hook |
ECO:0000269 |
C |
Figure 2: Figure 2 shows that the change in the flagellar hook changes the hook structure and therefore creates flagella that can't swim. |
complete | ||||
|
Contributes to |
GO:0009424 |
bacterial-type flagellum hook |
ECO:0000314 |
C |
Table 1: Table 1 shows that when the flgE gene was mutated the cells swim distance was only about 80 units whenever the gene was mutated in different ways. |
complete | ||||
|
Contributes to |
GO:0009424 |
bacterial-type flagellum hook |
ECO:0000269 |
C |
Figure 3: Figure 3 shows how the mutations affects the structure of the hook based on cryo-EM structure. |
complete | ||||
|
Contributes to |
GO:0009424 |
bacterial-type flagellum hook |
ECO:0000269 |
C |
Figure 4: Figure 4 shows how the hook structure changes from a microscopic view. The flgE mutants have hooks that are almost completely circular. |
complete | ||||
|
Contributes to |
GO:0009424 |
bacterial-type flagellum hook |
ECO:0000314 |
C |
Figure 5: Figure 5 shows that the flgE mutant had hard times trying to swim in the biofilm. |
complete | ||||
|
Contributes to |
GO:0009424 |
bacterial-type flagellum hook |
ECO:0000269 |
C |
Figure 6: Figure 6 shows the trajectory of the cells swimming, and the flgE mutants seem to swim in circles when trying to get nutrients. |
complete | ||||
|
involved_in |
GO:0071973 |
bacterial-type flagellum-dependent cell motility |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009288 |
bacterial-type flagellum |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009425 |
bacterial-type flagellum basal body |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0071973 |
bacterial-type flagellum-dependent cell motility |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000150958 |
P |
Seeded From UniProt |
complete | ||
Notes
References
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