GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
AGRFC:A9CJ98
Contents
Species (Taxon ID) | Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacteriumtumefaciens (strain C58)). (176299) | |
Gene Name(s) | pleD (ECO:0000313 with EMBL:AAK87090.1) | |
Protein Name(s) | Two component response regulator (ECO:0000313 with EMBL:AAK87090.1) | |
External Links | ||
UniProt | A9CJ98 | |
EMBL | AE007869 | |
PIR | A97517 AI2735 | |
RefSeq | NP_354305.1 WP_010971526.1 | |
ProteinModelPortal | A9CJ98 | |
STRING | 176299.Atu1297 | |
EnsemblBacteria | AAK87090 | |
GeneID | 1133335 | |
KEGG | atu:Atu1297 | |
PATRIC | 20812355 | |
eggNOG | ENOG4105BZU ENOG410XNMH | |
HOGENOM | HOG000167204 | |
KO | K02488 | |
OrthoDB | EOG6G4VQG | |
BioCyc | AGRO:ATU1297-MONOMER | |
Proteomes | UP000000813 | |
GO | GO:0005622 GO:0000160 | |
InterPro | IPR011006 IPR000160 IPR029787 IPR001789 | |
Pfam | PF00990 PF00072 | |
SMART | SM00267 SM00448 | |
SUPFAM | SSF52172 SSF55073 | |
TIGRFAMs | TIGR00254 | |
PROSITE | PS50887 PS50110 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
Contributes to |
GO:0030244 |
cellulose biosynthetic process |
ECO:0000269 |
P |
over expression of the gene triggered cellulose production and deletion of the gene reduced cellulose biosynthetic process |
complete | ||||
Contributes to |
GO:0030244 |
cellulose biosynthetic process |
ECO:0000269 |
P |
figure 3 of the paper indicates that the ECR phenotype of the ΔvisR mutant in the otherwise wild type background is substantially due to cellulose overproduction, and to a lesser extent due to UPP overproduction (although in the original screen with the EPS−UPP+ parent, the ECR phenotype was due to UPP alone). The ECR phenotype was largely abolished in the ΔvisRΔcelΔupp mutant (Fig. 3A), reflecting the participation of both polysaccharides. |
complete | ||||
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Barnhart, DM et al. (2013) CelR, an ortholog of the diguanylate cyclase PleD of Caulobacter, regulates cellulose synthesis in Agrobacterium tumefaciens. Appl. Environ. Microbiol. 79 7188-202 PubMed GONUTS page
- ↑ Xu, J et al. (2013) Genetic analysis of Agrobacterium tumefaciens unipolar polysaccharide production reveals complex integrated control of the motile-to-sessile switch. Mol. Microbiol. 89 929-48 PubMed GONUTS page