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9STRA:A0A4P2MHZ5
Contents
Species (Taxon ID) | Rhizosolenia setigera. (3005) | |
Gene Name(s) | No Information Provided. | |
Protein Name(s) | Isopententyl diphosphate isomerase/squalene synthase fusion protein (ECO:0000313 with EMBL:ASH96783.1) | |
External Links | ||
UniProt | A0A4P2MHZ5 | |
EMBL | MF351614 | |
CDD | cd00683 | |
Gene3D | 1.10.600.10 | |
InterPro | IPR008949 IPR015797 IPR000086 IPR002060 IPR006449 IPR019845 IPR033904 | |
Pfam | PF00293 | |
SFLD | SFLDG01018 | |
SUPFAM | SSF48576 SSF55811 | |
TIGRFAMs | TIGR01559 | |
PROSITE | PS51462 PS01044 PS01045 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
enables |
GO:0004310 |
farnesyl-diphosphate farnesyltransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
involved_in |
GO:0006696 |
ergosterol biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
||||
involved_in |
GO:0008610 |
lipid biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
||||
involved_in |
GO:0009058 |
biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
||||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
||||
enables |
GO:0016740 |
transferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
enables |
GO:0016765 |
transferase activity, transferring alkyl or aryl (other than methyl) groups |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
enables |
GO:0051996 |
squalene synthase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
enables |
GO:0016853 |
isomerase activity |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
||||
enables |
GO:0004310 |
farnesyl-diphosphate farnesyltransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
involved_in |
GO:0006696 |
ergosterol biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
||||
involved_in |
GO:0008610 |
lipid biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
||||
involved_in |
GO:0009058 |
biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
||||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
||||
enables |
GO:0016740 |
transferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
enables |
GO:0016765 |
transferase activity, transferring alkyl or aryl (other than methyl) groups |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
enables |
GO:0051996 |
squalene synthase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
enables |
GO:0016853 |
isomerase activity |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
||||
Contributes to |
GO:0008299 |
isoprenoid biosynthetic process |
ECO:0000325 |
chromatography evidence |
P |
Figure 5 Identification of enzyme reaction products of RsSQS and RsFDPS with RsIDI1 or RsIDI2 by GC‐MS analyses. (a) GC‐MS chromatogram of the enzyme reaction product of RsSQS (lower panel). RsSQS reaction product was confirmed as squalene based on comparison of retention time and mass spectra to an authentic squalene standard (upper panel). (b) GC‐MS chromatogram of the dephosphorylated enzyme reaction products of RsFDPS co‐incubated with or without RsIDI1 or RsIDI2 using IDP as the sole substrate (lower panels). Reaction products were confirmed as farnesol (FOH) or geraniol (GOH) based on comparison of retention times and mass spectra of authentic FOH and GOH standards (uppermost panel in b). |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Ferriols, VMEN et al. (2017) An exception among diatoms: unique organization of genes involved in isoprenoid biosynthesis in Rhizosolenia setigera CCMP 1694. Plant J. 92 822-833 PubMed GONUTS page