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9STRA:A0A0G2T690

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Species (Taxon ID) Rhizosolenia setigera. (3005)
Gene Name(s) No Information Provided.
Protein Name(s) Farnesyl pyrophosphate synthase (ECO:0000313 with EMBL:AKH49589.1)
External Links
UniProt A0A0G2T690
EMBL KM360174
GO GO:0004161
GO:0004337
GO:0045337
GO:0033384
Gene3D 1.10.600.10
InterPro IPR039702
IPR008949
IPR000092
IPR033749
PANTHER PTHR11525
Pfam PF00348
SUPFAM SSF48576
PROSITE PS00723
PS00444

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0004337

geranyltranstransferase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:2.5.1.10

F

Seeded From UniProt

enables

GO:0016740

transferase activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0808

F

Seeded From UniProt

enables

GO:0004161

dimethylallyltranstransferase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR039702

F

Seeded From UniProt

enables

GO:0004337

geranyltranstransferase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR039702

F

Seeded From UniProt

involved_in

GO:0045337

farnesyl diphosphate biosynthetic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR039702

P

Seeded From UniProt

involved_in

GO:0033384

geranyl diphosphate biosynthetic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR039702

P

Seeded From UniProt

involved_in

GO:0008299

isoprenoid biosynthetic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000092

P

Seeded From UniProt

enables

GO:0004337

geranyltranstransferase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:2.5.1.10

F

Seeded From UniProt

enables

GO:0016740

transferase activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0808

F

Seeded From UniProt

enables

GO:0004161

dimethylallyltranstransferase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR039702

F

Seeded From UniProt

enables

GO:0004337

geranyltranstransferase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR039702

F

Seeded From UniProt

involved_in

GO:0045337

farnesyl diphosphate biosynthetic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR039702

P

Seeded From UniProt

involved_in

GO:0033384

geranyl diphosphate biosynthetic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR039702

P

Seeded From UniProt

involved_in

GO:0008299

isoprenoid biosynthetic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000092

P

Seeded From UniProt

Contributes to

GO:0102059

2-cis,6-cis-farnesyl pyrophosphate synthase activity

PMID:25996801[1]

ECO:0000325

chromatography evidence

F

Figure 6. GC/MS total ion chromatogram of enzyme reaction products using IPP and DMAPP as substrates. Upper panels show prominent peaks corresponding to A) geraniol (GOH) and B) E,E-farnesol (E,E-FOH) with minor peaks for nerol (NOH) and Z,E-farnesol (Z,E-FOH) marked with asterisks (*). Lower panels are magnified images of the boxed areas in the upper panels. Other minor peaks in the upper panels are either contaminants or artefacts of treatment with alkaline phosphatase as determined in control alkaline phosphatase reactions using GPP or E,E-FPP standards.

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Ferriols, VM et al. (2015) Cloning and characterization of farnesyl pyrophosphate synthase from the highly branched isoprenoid producing diatom Rhizosolenia setigera. Sci Rep 5 10246 PubMed GONUTS page