GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
9STRA:A0A0G2T690
Contents
Species (Taxon ID) | Rhizosolenia setigera. (3005) | |
Gene Name(s) | No Information Provided. | |
Protein Name(s) | Farnesyl pyrophosphate synthase (ECO:0000313 with EMBL:AKH49589.1) | |
External Links | ||
UniProt | A0A0G2T690 | |
EMBL | KM360174 | |
GO | GO:0004161 GO:0004337 GO:0045337 GO:0033384 | |
Gene3D | 1.10.600.10 | |
InterPro | IPR039702 IPR008949 IPR000092 IPR033749 | |
PANTHER | PTHR11525 | |
Pfam | PF00348 | |
SUPFAM | SSF48576 | |
PROSITE | PS00723 PS00444 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
enables |
GO:0004337 |
geranyltranstransferase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
enables |
GO:0016740 |
transferase activity |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
||||
enables |
GO:0004161 |
dimethylallyltranstransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
enables |
GO:0004337 |
geranyltranstransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
involved_in |
GO:0045337 |
farnesyl diphosphate biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
||||
involved_in |
GO:0033384 |
geranyl diphosphate biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
||||
involved_in |
GO:0008299 |
isoprenoid biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
||||
enables |
GO:0004337 |
geranyltranstransferase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
enables |
GO:0016740 |
transferase activity |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
||||
enables |
GO:0004161 |
dimethylallyltranstransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
enables |
GO:0004337 |
geranyltranstransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
||||
involved_in |
GO:0045337 |
farnesyl diphosphate biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
||||
involved_in |
GO:0033384 |
geranyl diphosphate biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
||||
involved_in |
GO:0008299 |
isoprenoid biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
||||
Contributes to |
GO:0102059 |
2-cis,6-cis-farnesyl pyrophosphate synthase activity |
ECO:0000325 |
chromatography evidence |
F |
Figure 6. GC/MS total ion chromatogram of enzyme reaction products using IPP and DMAPP as substrates. Upper panels show prominent peaks corresponding to A) geraniol (GOH) and B) E,E-farnesol (E,E-FOH) with minor peaks for nerol (NOH) and Z,E-farnesol (Z,E-FOH) marked with asterisks (*). Lower panels are magnified images of the boxed areas in the upper panels. Other minor peaks in the upper panels are either contaminants or artefacts of treatment with alkaline phosphatase as determined in control alkaline phosphatase reactions using GPP or E,E-FPP standards. |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Ferriols, VM et al. (2015) Cloning and characterization of farnesyl pyrophosphate synthase from the highly branched isoprenoid producing diatom Rhizosolenia setigera. Sci Rep 5 10246 PubMed GONUTS page