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9CAUL:Q4W8B5
Contents
| Species (Taxon ID) | Brevundimonas sp. SD212. (281067) | |
| Gene Name(s) | crtB (ECO:0000313 with EMBL:BAD99409.1) | |
| Protein Name(s) | Phytoene synthase (ECO:0000313 with EMBL:BAD99409.1) | |
| External Links | ||
| UniProt | Q4W8B5 | |
| EMBL | AB181388 | |
| ProteinModelPortal | Q4W8B5 | |
| GO | GO:0016765 GO:0009058 | |
| Gene3D | 1.10.600.10 | |
| InterPro | IPR002060 IPR019845 IPR008949 | |
| Pfam | PF00494 | |
| SUPFAM | SSF48576 | |
| PROSITE | PS01044 PS01045 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0016117 |
carotenoid biosynthetic process |
ECO:0000314 |
P |
The sequence of the cartenoid biosynthesis gene cluster is shown in figure 1a. 1b shows the alignment of the region with that of other species. Genes from this region were inserted into E. coli and tagged with a specific lead sequence that makes them more efficiently translated. Table 3 shows the identification by spectroscopy of cartenoid precursors in a number of transformants expressing different combinations of crt genes. |
complete | |||||
|
involved_in |
GO:0016117 |
carotenoid biosynthetic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004310 |
farnesyl-diphosphate farnesyltransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006696 |
ergosterol biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009058 |
biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016740 |
transferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016765 |
transferase activity, transferring alkyl or aryl (other than methyl) groups |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0051996 |
squalene synthase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Nishida, Y et al. (2005) Elucidation of a carotenoid biosynthesis gene cluster encoding a novel enzyme, 2,2'-beta-hydroxylase, from Brevundimonas sp. strain SD212 and combinatorial biosynthesis of new or rare xanthophylls. Appl. Environ. Microbiol. 71 4286-96 PubMed GONUTS page
