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9CAUL:Q4W8B2
Contents
Species (Taxon ID) | Brevundimonas sp. SD212. (281067) | |
Gene Name(s) | crtE (ECO:0000313 with EMBL:BAD99412.1) | |
Protein Name(s) | GGPP synthase (ECO:0000313 with EMBL:BAD99412.1) | |
External Links | ||
UniProt | Q4W8B2 | |
EMBL | AB181388 | |
ProteinModelPortal | Q4W8B2 | |
GO | GO:0016740 GO:0008299 | |
Gene3D | 1.10.600.10 | |
InterPro | IPR000092 IPR017446 IPR008949 | |
PANTHER | PTHR12001 | |
Pfam | PF00348 | |
SUPFAM | SSF48576 | |
PROSITE | PS00723 PS00444 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0016117 |
carotenoid biosynthetic process |
ECO:0000314 |
P |
The sequence of the cartenoid biosynthesis gene cluster is shown in figure 1a. 1b shows the alignment of the region with that of other species. Genes from this region were inserted into E. coli and tagged with a specific lead sequence that makes them more efficiently translated. Table 3 shows the identification by spectroscopy of cartenoid precursors in a number of transformants expressing different combinations of crt genes. Homology suggests that crtE may be involved in binding to the isoprenoid substrates and/or in the common oxidation reactions. |
complete | |||||
involved_in |
GO:0016117 |
carotenoid biosynthetic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008299 |
isoprenoid biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016740 |
transferase activity |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Nishida, Y et al. (2005) Elucidation of a carotenoid biosynthesis gene cluster encoding a novel enzyme, 2,2'-beta-hydroxylase, from Brevundimonas sp. strain SD212 and combinatorial biosynthesis of new or rare xanthophylls. Appl. Environ. Microbiol. 71 4286-96 PubMed GONUTS page