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User:Jonesbg2

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Phage Hunters Spring 2017

My Annotations

StatusPageDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
KLEPN:W1GLZ82017-04-19 14:01:32 CDTGO:0019028 viral capsid (C)GO_REF:0000100ECO:0000247 sequence alignment evidence used in manual assertion

Gp7 is a protein subunit of the capsid epislon15 (Q858G8). A blastp with epsilon15 capsid protein as the query matches a Klebsiella pneumoniae (W1GLZ8)protein and contains a 100% Query Coverage, 0.0 e-value, and a 93% identity.

challenge
KLEPN:W1GLZ82017-04-19 14:01:32 CDTGO:0019028 viral capsid (C)GO_REF:0000100ECO:0000247 sequence alignment evidence used in manual assertion
Gp10 is a protein subunit of the capsid of bacteriophage, epsilon15 (Q858G8). A blastp using epsilon15 as the query with a Klebsiella pneumoniae (W1GLZ8) protein shows a 100% Query Coverage, 0.0 e-value, and a 93% Identity.
challenge
9ENTR:V5U0J52017-04-19 14:13:04 CDTGO:0019028 viral capsid (C)GO_REF:0000100ECO:0000247 sequence alignment evidence used in manual assertion

Gp7 is a protein subunit of the capsid of epsilon15 (Q858G8). A blastp with epsilon15 (Q858G8) as the query and a Cronobacter malonaticus (V5UOJ5) protein results in 99% Query Coverage, 0.0 e-value, and a 91% Identity.

challenge
9ENTR:V5U0J52017-04-19 14:13:05 CDTGO:0019028 viral capsid (C)GO_REF:0000100ECO:0000247 sequence alignment evidence used in manual assertion

Gp10 is a protein subunit of the capsid of bacteriophage, epsilon15 and is structurally similar to many phages. A blastp with epsilon15 (Q858G8) and a Cronobacter malonaticus (V5UOJ5) protein results in 99% Query Coverage, 0.0 e-value, and a 91% Identity.

challenge
BORBO:A0A0H3P1C52017-04-19 14:07:14 CDTGO:0019028 viral capsid (C)GO_REF:0000100ECO:0000247 sequence alignment evidence used in manual assertion

The sequence was run on blast and the results showed significant similarity with the major capsid protein of episolon15 (Q858G8) as the query and a Salmonella enterica (AOAOH3P1C5) protein. There was an e-value of 0.0 and a percent identity of 100%, as well as a query cover of 100. This proves that there is a capsid protein in epsilon15.

challenge

acceptable:0
unacceptable:0
requires_changes:0
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Annotations challenged by Jonesbg2

StatusAuthor,GroupPageGO Term (Aspect)ReferenceEvidenceLinksPage history

0 annotations fixed by Jonesbg2

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