Phage Hunters Spring 2017
My Annotations
| Status | Page | Date/Time | GO Term (Aspect) | Reference | Evidence | Notes | Links |
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| requireschanges | STRGL:LYSM1 | 2017-04-23 19:22:49 CDT | 0008152 metabolic process (P) | PMID:11427528 | ECO:0000314 direct assay evidence used in manual assertion | The metabolic process has to do with the structure of the overall protein. The structure of Cellosyl comprised to a single domain,is demonstrated in figure 2. Where it is shown that the structure is comprised of eight beta strands and six alpha helices. Shown with the strands forming the staves of the barrel and the helices located around it. Helices are depicted in red, loops in green, the parallel βeta-strands in blue, and the antiparallel βeta-strand is highlighted in yellow.
| challenge |
| requireschanges | 9CAUD:D9ZNF3 | 2017-04-23 22:24:19 CDT | GO:0009253 peptidoglycan catabolic process (P) | PMID:26683375 | ECO:0000315 mutant phenotype evidence used in manual assertion | In figure 4 they show a sequence alignment on the nucleotide level of CTP1L and CS74L. In the figure there are other related endolysins shown that are present. The putative Shine-Dalgarno region is shown in figure 4a and 4b in the red. It also indicates that the start codon is GTG. The nucleotide sequence used during E. coli expression of when they did the sequence alignment was derived from the original bacteriophage DNA. To test whether the wild-type sequence encoded a secondary translation site to the wild type.
| challenge |
acceptable:0
unacceptable:0
requires_changes:2
flagged:0
Annotations challenged by Ikrama2
| Status | Author,Group | Page | GO Term (Aspect) | Reference | Evidence | Links | Page history |
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0 annotations fixed by Ikrama2
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