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TableEdit
YERPG:A9R4C4
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| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status | |
|---|---|---|---|---|---|---|---|---|---|
|
public |
GO:0090046 |
regulation of transcription regulator activity |
PMID:21345178 |
IMP: Inferred from Mutant Phenotype |
P |
OmpR was found to have an effect on 224 genes based on cDNA microarray data, representing 4% of the proteins in the cell. 16 genes were validated to have OmpR-dependent transcription, including ompR, ompC, ompF, and ompX, which were further classified. Figure 2 gives a comparison of mRNA levels between WT and ompR mutant using RT-PCR and LacZ fusion. OmpC, ompF, and ompZ show between a 3 and 25-fold decrease in expression in the mutant. |
complete | ||
|
public |
GO:0000156 |
phosphorelay response regulator activity |
GO_REF:0000002 |
IEA: Inferred from Electronic Annotation |
InterPro:IPR001789 |
F |
Seeded From UniProt |
complete | |
|
public |
GO:0000160 |
phosphorelay signal transduction system |
GO_REF:0000002 |
IEA: Inferred from Electronic Annotation |
InterPro:IPR001789 |
P |
Seeded From UniProt |
complete | |
|
public |
GO:0006950 |
response to stress |
PMID:21345178 |
IMP: Inferred from Mutant Phenotype |
P |
Figure 1 shows a decreased survival when exposed to high osmolarity, high temperature, and low pH for the ompR mutant as well as a higher rate of phagocytosis. |
complete | ||
|
public |
GO:0000160 |
phosphorelay signal transduction system |
GO_REF:0000038 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0902 |
P |
Seeded From UniProt |
complete | |
|
public |
GO:0003677 |
DNA binding |
GO_REF:0000002 |
IEA: Inferred from Electronic Annotation |
InterPro:IPR001867 |
F |
Seeded From UniProt |
complete | |
|
public |
GO:0006355 |
regulation of transcription, DNA-templated |
GO_REF:0000002 |
IEA: Inferred from Electronic Annotation |
InterPro:IPR001789 |
P |
Seeded From UniProt |
complete | |
|
public |
GO:0035556 |
intracellular signal transduction |
GO_REF:0000002 |
IEA: Inferred from Electronic Annotation |
InterPro:IPR001789 |
P |
Seeded From UniProt |
complete |
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Working copy:
The highlighted rows are different from the copy of the table from the wiki. This includes rows that have been edited and rows that you added. You can delete rows from the working copy in this view before continuing.| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status | |
|---|---|---|---|---|---|---|---|---|---|---|---|
|
public |
GO:0090046 |
regulation of transcription regulator activity |
PMID:21345178 |
P |
OmpR was found to have an effect on 224 genes based on cDNA microarray data, representing 4% of the proteins in the cell. 16 genes were validated to have OmpR-dependent transcription, including ompR, ompC, ompF, and ompX, which were further classified. Figure 2 gives a comparison of mRNA levels between WT and ompR mutant using RT-PCR and LacZ fusion. OmpC, ompF, and ompZ show between a 3 and 25-fold decrease in expression in the mutant. |
complete | |||||
|
protected |
GO:0000156 |
phosphorelay response regulator activity |
GO_REF:0000002 |
InterPro:IPR001789 |
F |
Seeded From UniProt |
complete | ||||
|
protected |
GO:0000160 |
phosphorelay signal transduction system |
GO_REF:0000002 |
InterPro:IPR001789 |
P |
Seeded From UniProt |
complete | ||||
|
public |
GO:0006950 |
response to stress |
PMID:21345178 |
P |
Figure 1 shows a decreased survival when exposed to high osmolarity, high temperature, and low pH for the ompR mutant as well as a higher rate of phagocytosis. |
complete | |||||
|
protected |
GO:0000160 |
phosphorelay signal transduction system |
GO_REF:0000038 |
UniProtKB-KW:KW-0902 |
P |
Seeded From UniProt |
complete | ||||
|
protected |
GO:0003677 |
DNA binding |
GO_REF:0000002 |
InterPro:IPR001867 |
F |
Seeded From UniProt |
complete | ||||
|
protected |
GO:0006355 |
regulation of transcription, DNA-templated |
GO_REF:0000002 |
InterPro:IPR001789 |
P |
Seeded From UniProt |
complete | ||||
|
protected |
GO:0035556 |
intracellular signal transduction |
GO_REF:0000002 |
InterPro:IPR001789 |
P |
Seeded From UniProt |
complete |
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