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DANRE:F1R8Z9

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Species (Taxon ID) Danio rerio (Zebrafish) (Brachydanio rerio). (7955)
Gene Name(s) foxj1b
Protein Name(s) Uncharacterized protein
External Links
UniProt F1R8Z9
EMBL CR318663
CU207309
RefSeq XP_005156198.1
UniGene Dr.37893
Ensembl ENSDART00000126676
GeneID 494105
KEGG dre:494105
CTD 494105
ZFIN ZDB-GENE-041212-76
GeneTree ENSGT00750000117242
OMA DPQYADM
OrthoDB EOG7T4MKM
TreeFam TF333250
GO GO:0043565
GO:0003700
Gene3D 1.10.10.10
InterPro IPR001766
IPR018122
IPR011991
Pfam PF00250
PRINTS PR00053
SMART SM00339
PROSITE PS00657
PS00658
PS50039

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0060271

cilium assembly

PMID:19011630[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0060088

auditory receptor cell stereocilium organization

PMID:21205793[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

ZFIN:ZDB-MRPHLNO-101117-4

P

Seeded From UniProt

complete

involved_in

GO:0060088

auditory receptor cell stereocilium organization

PMID:21205793[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

ZFIN:ZDB-GENO-111118-14

P

Seeded From UniProt

complete

involved_in

GO:0007368

determination of left/right symmetry

PMID:19284996[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

ZFIN:ZDB-MRPHLNO-090513-3

P

Seeded From UniProt

complete

involved_in

GO:0003146

heart jogging

PMID:19284996[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

ZFIN:ZDB-MRPHLNO-090513-3

P

Seeded From UniProt

complete

involved_in

GO:0001947

heart looping

PMID:19284996[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

ZFIN:ZDB-MRPHLNO-090513-3

P

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001766
InterPro:IPR018122
InterPro:IPR030456

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001766
InterPro:IPR018122
InterPro:IPR030456

P

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001766
InterPro:IPR018122
InterPro:IPR030456

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

involved_in

GO:0030030

cell projection organization

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0970

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Yu, X et al. (2008) Foxj1 transcription factors are master regulators of the motile ciliogenic program. Nat. Genet. 40 1445-53 PubMed GONUTS page
  2. 2.0 2.1 Yu, X et al. (2011) Cilia-driven fluid flow as an epigenetic cue for otolith biomineralization on sensory hair cells of the inner ear. Development 138 487-94 PubMed GONUTS page
  3. 3.0 3.1 3.2 Tian, T et al. (2009) Both foxj1a and foxj1b are implicated in left-right asymmetric development in zebrafish embryos. Biochem. Biophys. Res. Commun. 380 537-42 PubMed GONUTS page