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SCHPO:PDC1

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Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

public

GO:0033962

cytoplasmic mRNA processing body assembly

PMID:23319050

ECO:0000315

P

Figure 5 demonstrates the requirement of pdc1 in p-body assembly and Figure 6 shows the "scaffolding" region of the protein for p-body assembly.

complete
CACAO 7236

public

GO:1901835

positive regulation of deadenylation-independent decapping of nuclear-transcribed mRNA

PMID:23319050

ECO:0000315

P

Figure 7 B and C shows the lack of mRNA decapping in pdc1 mutants and enhanced decapping activity when overexpressed as compared to the wild-type.

complete
CACAO 7237

protected

involved_in

GO:0019655

glycolytic fermentation to ethanol

GO_REF:0000024

ECO:0000266

sequence orthology evidence used in manual assertion

SGD:S000004124

P

Seeded From UniProt

complete

protected

involved_in

GO:0006090

pyruvate metabolic process

GO_REF:0000024

ECO:0000266

sequence orthology evidence used in manual assertion

SGD:S000004124

P

Seeded From UniProt

complete

protected

part_of

GO:0005829

cytosol

PMID:16823372

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

protected

part_of

GO:0005634

nucleus

PMID:16823372

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

protected

enables

GO:0004737

pyruvate decarboxylase activity

GO_REF:0000024

ECO:0000266

sequence orthology evidence used in manual assertion

SGD:S000003319

F

Seeded From UniProt

complete

protected

enables

GO:0047433

branched-chain-2-oxoacid decarboxylase activity

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001826953
SGD:S000004034
SGD:S000004124

F

Seeded From UniProt

complete

protected

enables

GO:0016831

carboxy-lyase activity

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000438887
SGD:S000002238
SGD:S000002788

F

Seeded From UniProt

complete

protected

involved_in

GO:0006569

tryptophan catabolic process

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001826953
SGD:S000002788
SGD:S000003319
SGD:S000004034
SGD:S000004124

P

Seeded From UniProt

complete

protected

involved_in

GO:0006559

L-phenylalanine catabolic process

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001826953
SGD:S000002788
SGD:S000003319
SGD:S000004034
SGD:S000004124

P

Seeded From UniProt

complete

protected

involved_in

GO:0006090

pyruvate metabolic process

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001826953
SGD:S000004034
SGD:S000004124

P

Seeded From UniProt

complete

protected

involved_in

GO:0006067

ethanol metabolic process

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001826953
SGD:S000003319

P

Seeded From UniProt

complete

protected

part_of

GO:0005829

cytosol

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000438887
SGD:S000004034
TAIR:locus:2123827
TAIR:locus:2160170

C

Seeded From UniProt

complete

protected

enables

GO:0004737

pyruvate decarboxylase activity

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001826953
SGD:S000003319
SGD:S000004034
SGD:S000004124

F

Seeded From UniProt

complete

protected

involved_in

GO:0000949

aromatic amino acid family catabolic process to alcohol via Ehrlich pathway

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001826953
SGD:S000002788
SGD:S000003319
SGD:S000004034
SGD:S000004124

P

Seeded From UniProt

complete

protected

enables

GO:0000287

magnesium ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR012000

F

Seeded From UniProt

complete

protected

enables

GO:0003824

catalytic activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011766

F

Seeded From UniProt

complete

protected

enables

GO:0016831

carboxy-lyase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR012110

F

Seeded From UniProt

complete

protected

enables

GO:0030976

thiamine pyrophosphate binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011766
InterPro:IPR012000
InterPro:IPR012001

F

Seeded From UniProt

complete

protected

enables

GO:0004737

pyruvate decarboxylase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:4.1.1.1

F

Seeded From UniProt

complete

protected

enables

GO:0016829

lyase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0456

F

Seeded From UniProt

complete

protected

enables

GO:0016831

carboxy-lyase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0210

F

Seeded From UniProt

complete

protected

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete




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