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CHICK:HMGB3

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Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

protected

enables

GO:0000400

four-way junction DNA binding

PMID:11080451

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

protected

enables

GO:0008301

DNA binding, bending

PMID:11080451

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

protected

involved_in

GO:0032392

DNA geometric change

PMID:11080451

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

protected

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:96113
MGI:MGI:96157
PANTHER:PTN001009623
UniProtKB:P09429
UniProtKB:P26583
WB:WBGene00001972

P

Seeded From UniProt

complete

protected

involved_in

GO:0045089

positive regulation of innate immune response

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:96113
MGI:MGI:96157
PANTHER:PTN001009623
UniProtKB:P09429
UniProtKB:P10103
UniProtKB:P12682

P

Seeded From UniProt

complete

protected

enables

GO:0008301

DNA binding, bending

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0004362
FB:FBgn0278608
PANTHER:PTN000345179
RGD:2802
SGD:S000002157
SGD:S000004676
SGD:S000006256
UniProtKB:F1RJ01
UniProtKB:F2Z594
UniProtKB:P09429
UniProtKB:P10103
UniProtKB:P12682
UniProtKB:P17741
UniProtKB:P26583
UniProtKB:P26584
UniProtKB:P40618
UniProtKB:P40673
UniProtKB:Q32L31
UniProtKB:Q8I616
UniProtKB:Q8IB14
UniProtKB:Q9YH06

F

Seeded From UniProt

complete

protected

enables

GO:0008134

transcription factor binding

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0278608
MGI:MGI:96157
PANTHER:PTN000345179
RGD:2802
UniProtKB:P09429

F

Seeded From UniProt

complete

protected

involved_in

GO:0006357

regulation of transcription by RNA polymerase II

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0278608
MGI:MGI:96113
MGI:MGI:96157
PANTHER:PTN000346026
UniProtKB:P09429
UniProtKB:P26583
WB:WBGene00001972

P

Seeded From UniProt

complete

protected

involved_in

GO:0006338

chromatin remodeling

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000345179
SGD:S000002157
SGD:S000006256

P

Seeded From UniProt

complete

protected

involved_in

GO:0006310

DNA recombination

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001009623
UniProtKB:P09429
UniProtKB:P10103
UniProtKB:P40673
UniProtKB:Q32L31

P

Seeded From UniProt

complete

protected

part_of

GO:0005737

cytoplasm

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:96113
MGI:MGI:96157
PANTHER:PTN001009623
RGD:2802
UniProtKB:P26583

C

Seeded From UniProt

complete

protected

part_of

GO:0000790

nuclear chromatin

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:96157
PANTHER:PTN000346026
SGD:S000002160
UniProtKB:F1RJ01
UniProtKB:F2Z594
UniProtKB:P12682
UniProtKB:P17741

C

Seeded From UniProt

complete

protected

involved_in

GO:0045638

negative regulation of myeloid cell differentiation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O54879
ensembl:ENSMUSP00000110229

P

Seeded From UniProt

complete

protected

involved_in

GO:0045578

negative regulation of B cell differentiation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O54879
ensembl:ENSMUSP00000110229

P

Seeded From UniProt

complete

protected

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O54879
ensembl:ENSMUSP00000110229

C

Seeded From UniProt

complete

protected

enables

GO:0003723

RNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O54879
ensembl:ENSMUSP00000110229

F

Seeded From UniProt

complete

protected

enables

GO:0003677

DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O54879
ensembl:ENSMUSP00000110229

F

Seeded From UniProt

complete

protected

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR017967

F

Seeded From UniProt

complete

protected

part_of

GO:0005634

nucleus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR017967

C

Seeded From UniProt

complete

protected

involved_in

GO:0002376

immune system process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0391

P

Seeded From UniProt

complete

protected

involved_in

GO:0045087

innate immune response

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0399

P

Seeded From UniProt

complete

protected

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

protected

part_of

GO:0005694

chromosome

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0158
UniProtKB-SubCell:SL-0468

C

Seeded From UniProt

complete

protected

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

protected

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete




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