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ECOLI:LEXA

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Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

public

GO:0016481

negative regulation of transcription

PMID:368030

ECO:0000315

1

Figure 2 and Figure 3

complete

protected

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

PMID:10760155

ECO:0005653

northern assay evidence used in manual assertion

P

Seeded From UniProt

complete

public

Contributes to

GO:0009432

SOS response

PMID:21912525

ECO:0000314

P

Figure 3:RecA extended interface patch residues are involved in RecA active filament formation. The bacterial recombinase protein RecA is pivotal to DNA repair [1]–[4] and to orchestrate the bacterial DNA damage response (SOS response) against natural, or drug-induced, genotoxic conditions.

complete

public

Contributes to

GO:0009432

PMID:21912525

ECO:0000315

Figure 3:RecA extended interface patch residues are involved in RecA active filament formation. The bacterial recombinase protein RecA is pivotal to DNA repair [1]–[4] and to orchestrate the bacterial DNA damage response (SOS response) against natural, or drug-induced, genotoxic conditions.

complete

protected

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

PMID:21529368

ECO:0001808

reverse transcription polymerase chain reaction evidence used in manual assertion

P

Seeded From UniProt

complete

protected

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

PMID:19210620

ECO:0001808

reverse transcription polymerase chain reaction evidence used in manual assertion

P

Seeded From UniProt

complete

protected

part_of

GO:0032993

protein-DNA complex

PMID:10760155

ECO:0005643

hydroxyl-radical footprinting evidence used in manual assertion

RefSeq:NC_000913.2

C

Seeded From UniProt

complete

protected

part_of

GO:0032993

protein-DNA complex

PMID:21529368

ECO:0001807

electrophoretic mobility shift assay evidence used in manual assertion

C

Seeded From UniProt

complete

protected

part_of

GO:0032993

protein-DNA complex

PMID:19210620

ECO:0001807

electrophoretic mobility shift assay evidence used in manual assertion

C

Seeded From UniProt

complete

protected

part_of

GO:0032993

protein-DNA complex

PMID:10760155

ECO:0001807

electrophoretic mobility shift assay evidence used in manual assertion

C

Seeded From UniProt

complete

protected

enables

GO:0001217

DNA-binding transcription repressor activity

PMID:10760155

ECO:0005643

hydroxyl-radical footprinting evidence used in manual assertion

RefSeq:NC_000913.2

F

Seeded From UniProt

complete

protected

enables

GO:0001217

DNA-binding transcription repressor activity

PMID:21529368

ECO:0001807

electrophoretic mobility shift assay evidence used in manual assertion

F

Seeded From UniProt

complete

protected

enables

GO:0001217

DNA-binding transcription repressor activity

PMID:19210620

ECO:0001807

electrophoretic mobility shift assay evidence used in manual assertion

F

Seeded From UniProt

complete

protected

enables

GO:0001217

DNA-binding transcription repressor activity

PMID:10760155

ECO:0001807

electrophoretic mobility shift assay evidence used in manual assertion

F

Seeded From UniProt

complete

protected

enables

GO:0000976

transcription regulatory region sequence-specific DNA binding

PMID:10760155

ECO:0005643

hydroxyl-radical footprinting evidence used in manual assertion

RefSeq:NC_000913.2

F

Seeded From UniProt

complete

protected

enables

GO:0000976

transcription regulatory region sequence-specific DNA binding

PMID:21529368

ECO:0001807

electrophoretic mobility shift assay evidence used in manual assertion

F

Seeded From UniProt

complete

protected

enables

GO:0000976

transcription regulatory region sequence-specific DNA binding

PMID:19210620

ECO:0001807

electrophoretic mobility shift assay evidence used in manual assertion

F

Seeded From UniProt

complete

protected

enables

GO:0000976

transcription regulatory region sequence-specific DNA binding

PMID:10760155

ECO:0001807

electrophoretic mobility shift assay evidence used in manual assertion

F

Seeded From UniProt

complete

protected

enables

GO:0042802

identical protein binding

PMID:24561554

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P0A7C2

F

Seeded From UniProt

complete

protected

enables

GO:0042802

identical protein binding

PMID:20703307

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P0A7C2

F

Seeded From UniProt

complete

protected

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

PMID:10760155

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

protected

involved_in

GO:0009432

SOS response

PMID:4343824

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

protected

involved_in

GO:0006974

cellular response to DNA damage stimulus

PMID:2834329

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

protected

enables

GO:0003677

DNA binding

PMID:10760155

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

protected

involved_in

GO:0009432

SOS response

PMID:3542969

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

protected

involved_in

GO:0006351

transcription, DNA-templated

PMID:160562

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

protected

involved_in

GO:0006351

transcription, DNA-templated

PMID:7027256

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

protected

involved_in

GO:0006351

transcription, DNA-templated

PMID:7027255

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

protected

part_of

GO:0005829

cytosol

PMID:18304323

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

protected

part_of

GO:0005829

cytosol

PMID:15911532

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

protected

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006197

F

Seeded From UniProt

complete

protected

enables

GO:0004252

serine-type endopeptidase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006199
InterPro:IPR006200

F

Seeded From UniProt

complete

protected

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006197

P

Seeded From UniProt

complete

protected

involved_in

GO:0006508

proteolysis

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006199

P

Seeded From UniProt

complete

protected

involved_in

GO:0009432

SOS response

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006200

P

Seeded From UniProt

complete

protected

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006200

P

Seeded From UniProt

complete

protected

involved_in

GO:0006260

DNA replication

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000075652

P

Seeded From UniProt

complete

protected

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000075652

P

Seeded From UniProt

complete

protected

enables

GO:0003677

DNA binding

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000075652

F

Seeded From UniProt

complete

protected

involved_in

GO:0009432

SOS response

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000075652

P

Seeded From UniProt

complete

protected

involved_in

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000075652

P

Seeded From UniProt

complete

protected

enables

GO:0004252

serine-type endopeptidase activity

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000075652

F

Seeded From UniProt

complete

protected

involved_in

GO:0006281

DNA repair

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000075652

P

Seeded From UniProt

complete

protected

involved_in

GO:0006281

DNA repair

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0234

P

Seeded From UniProt

complete

protected

enables

GO:0016787

hydrolase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0378

F

Seeded From UniProt

complete

protected

involved_in

GO:0006260

DNA replication

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0235

P

Seeded From UniProt

complete

protected

involved_in

GO:0009432

SOS response

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0742

P

Seeded From UniProt

complete

protected

involved_in

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0227

P

Seeded From UniProt

complete

protected

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete



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