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XANCP:CLP

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Species (Taxon ID) Xanthomonas campestris pv. campestris (strain ATCC 33913 / NCPPB 528 /LMG 568). (190485)
Gene Name(s) clp
Protein Name(s) CRP-like protein Clp

Catabolite activation-like protein CAP-like

External Links
UniProt P22260
EMBL M58745
M92289
AF111840
AE008922
PIR A42949
RefSeq NP_635866.1
PDB 3IWZ
PDBsum 3IWZ
ProteinModelPortal P22260
STRING 190485.XCC0472
EnsemblBacteria AAM39790
GeneID 1000958
KEGG xcc:XCC0472
PATRIC 24071563
eggNOG COG0664
HOGENOM HOG000250565
KO K10914
OMA SMAYNIM
OrthoDB EOG69GZGV
BioCyc XCAM190485:GIXZ-472-MONOMER
EvolutionaryTrace P22260
Proteomes UP000001010
GO GO:0005737
GO:0003824
GO:0035438
GO:0003677
GO:0046983
GO:0003700
GO:0009405
GO:0006355
GO:0006351
Gene3D 1.10.10.10
2.60.120.10
InterPro IPR018490
IPR000595
IPR012318
IPR014710
IPR001808
IPR018335
IPR011991
Pfam PF00027
PF00325
PRINTS PR00034
SMART SM00100
SM00419
SUPFAM SSF51206
PROSITE PS50042
PS00042
PS51063

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0046983

protein dimerization activity

PMID:20004667[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0035438

cyclic-di-GMP binding

PMID:20004667[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

PMID:17378922[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:17378922[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

PMID:20004667[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10164
EcoGene:EG10325
PANTHER:PTN000705815

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10325
PANTHER:PTN000705815
UniProtKB:P22260
UniProtKB:P46148
UniProtKB:P9WMH3

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR012318

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR018335

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR012318
InterPro:IPR018335

P

Seeded From UniProt

complete

involved_in

GO:0008152

metabolic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0021

P

Seeded From UniProt

complete

enables

GO:0003824

catalytic activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0021

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

involved_in

GO:0009405

pathogenesis

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0843

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Chin, KH et al. (2010) The cAMP receptor-like protein CLP is a novel c-di-GMP receptor linking cell-cell signaling to virulence gene expression in Xanthomonas campestris. J. Mol. Biol. 396 646-62 PubMed GONUTS page
  2. 2.0 2.1 He, YW et al. (2007) Xanthomonas campestris cell-cell communication involves a putative nucleotide receptor protein Clp and a hierarchical signalling network. Mol. Microbiol. 64 281-92 PubMed GONUTS page
  3. 3.0 3.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page