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VIBCH:HLYU
Contents
| Species (Taxon ID) | Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961). (243277) | |
| Gene Name(s) | hlyU | |
| Protein Name(s) | Transcriptional activator HlyU | |
| External Links | ||
| UniProt | P52695 | |
| EMBL | X66866 AJ002395 AE003852 | |
| PIR | S37313 | |
| RefSeq | NP_230327.1 WP_001888967.1 | |
| PDB | 4K2E | |
| PDBsum | 4K2E | |
| ProteinModelPortal | P52695 | |
| STRING | 243277.VC0678 | |
| DNASU | 2615467 | |
| EnsemblBacteria | AAF93843 | |
| GeneID | 2615467 | |
| KEGG | vch:VC0678 | |
| PATRIC | 20080473 | |
| eggNOG | COG0640 | |
| OMA | SHEVREM | |
| OrthoDB | EOG6B3684 | |
| BioCyc | RETL1328306-WGS:GSTH-3947-MONOMER VCHO:VC0678-MONOMER | |
| Proteomes | UP000000584 | |
| GO | GO:0003677 GO:0003700 GO:0009405 GO:0006355 GO:0006351 | |
| Gene3D | 1.10.10.10 | |
| InterPro | IPR001845 IPR011991 | |
| Pfam | PF01022 | |
| PRINTS | PR00778 | |
| SMART | SM00418 | |
| PROSITE | PS50987 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0045893 |
positive regulation of transcription, DNA-dependent |
ECO:0000315 |
P |
Fig 6: hlyU mutant is shown to have decreased haemolytic activity, meaning it is a positive transcriptional regulator of virulence genes. |
complete | |||||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
Missing: with/from | |||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
Missing: with/from | |||
|
enables |
GO:0044212 |
transcription regulatory region DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002108422 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG12235 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009405 |
pathogenesis |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Williams, SG et al. (1993) The transcriptional activator HlyU of Vibrio cholerae: nucleotide sequence and role in virulence gene expression. Mol. Microbiol. 9 751-60 PubMed GONUTS page
- ↑ 2.0 2.1 Heidelberg, JF et al. (2000) DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae. Nature 406 477-83 PubMed GONUTS page
- ↑ 3.0 3.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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