User:Qdickinson

My Annotations

Status	Page	Date/Time	GO Term (Aspect)	Reference	Evidence	Notes	Links
requireschanges	AZOBR:Q9FD94	2013-09-15 15:55:08 CDT	GO:0009399 nitrogen fixation (P)	PMID:22267004	ECO:0000314 direct assay evidence used in manual assertion	Fig. 2 Shows increased DNA binding with increased amounts of NifA based off of gel electrophoresis assay.	challenge
requireschanges	?	2013-10-13 12:38:52 CDT	GO:0031072 heat shock protein binding (F)	PMID:23975754	ECO:0000314 direct assay evidence used in manual assertion	Figure 3. Abscisic acid binds to GRP78	challenge
requireschanges	?	2013-10-13 12:42:31 CDT	GO:0031072 heat shock protein binding (F)	PMID:23975754	ECO:0000314 direct assay evidence used in manual assertion	Fig. 5 DnaJ activates ABA binding to GRP78	challenge
requireschanges	HUMAN:DJB12	2013-10-13 12:54:53 CDT	GO:0031072 heat shock protein binding (F)	PMID:23975754	ECO:0000314 direct assay evidence used in manual assertion	Fig. 5 DnaJ activates ABA binding to GRP78	challenge
unacceptable	HUMAN:DJB12	2013-10-13 12:55:54 CDT	GO:0031072 heat shock protein binding (F)	PMID:23975754	ECO:0000314 direct assay evidence used in manual assertion	Fig. 5 DnaJ activates ABA binding to HSP70-2	challenge
updatedbyinstructor	9ACTN:F8WSY7	2013-11-10 14:02:13 CST	GO:0031176 endo-1,4-beta-xylanase activity (F)	PMID:24197520	ECO:0000314 direct assay evidence used in manual assertion	Table 3: Shows increased activity against birch wood xylan vs oat spelt xylan and wheat arabinoxylan, suggesting that it is able to break down β-1,4-xylan regions lacking substitutions.	challenge
updatedbyinstructor	STRLN:Q54363	2013-11-10 14:31:32 CST	GO:0008170 N-methyltransferase activity (F)	PMID:24166757	ECO:0000314 direct assay evidence used in manual assertion	Figure 2:Plot shows rate of conversion of N-demethyllincomycin (NDL) into lincomycin showing methyltransferase activity.	challenge
updatedbyinstructor	9ACTN:E9JES0	2013-11-10 14:34:28 CST	GO:0008170 N-methyltransferase activity (F)	PMID:24166757	ECO:0000314 direct assay evidence used in manual assertion	Figure 2:Plot shows rate of conversion of N-demethyllincomycin (NDL) into lincomycin showing methyltransferase activity.	challenge
acceptable	BACSU:YMDB	2013-11-10 14:54:38 CST	GO:0004113 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity (F)	PMID:24163345	ECO:0000314 direct assay evidence used in manual assertion	Table 4: Shows kinetics of YmdB against 2'3' cyclic mononucleotides	challenge
requireschanges	BACSU:YMDB	2013-11-10 14:57:53 CST	GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity (F)	PMID:24163345	ECO:0000314 direct assay evidence used in manual assertion	Table 4: Shows kinetics with 3'5' cyclic mononucleotides	challenge
requireschanges	BACSU:YMDB	2013-11-10 15:26:57 CST	GO:1902201 negative regulation of bacterial-type flagellar cell motility (P)	PMID:21856853	ECO:0000315 mutant phenotype evidence used in manual assertion	Fig. 1 Shows accumulation of flagellin Hag in YmdB deletion strain	challenge
requireschanges	BACSU:YMDB	2013-11-10 15:37:09 CST	GO:1900192 positive regulation of single-species biofilm formation (P)	PMID:21856853	ECO:0000315 mutant phenotype evidence used in manual assertion	Fig 2: Shows visual effects of biofilm production using a YmdB deletion mutant. YmdB deletion mutants are unable to form biofilms.	challenge

acceptable:1
unacceptable:1
requires_changes:7
flagged:0

Annotations challenged by Qdickinson

Status	Author,Group	Page	GO Term (Aspect)	Reference	Evidence	Links	Page history

0 annotations fixed by Qdickinson