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User:Qdickinson

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My Annotations

StatusPageDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
requireschangesAZOBR:Q9FD942013-09-15 15:55:08 CDTGO:0009399 nitrogen fixation (P)PMID:22267004ECO:0000314 direct assay evidence used in manual assertion

Fig. 2 Shows increased DNA binding with increased amounts of NifA based off of gel electrophoresis assay.

challenge
requireschanges?2013-10-13 12:38:52 CDTGO:0031072 heat shock protein binding (F)PMID:23975754ECO:0000314 direct assay evidence used in manual assertion

Figure 3. Abscisic acid binds to GRP78

challenge
requireschanges?2013-10-13 12:42:31 CDTGO:0031072 heat shock protein binding (F)PMID:23975754ECO:0000314 direct assay evidence used in manual assertion

Fig. 5 DnaJ activates ABA binding to GRP78

challenge
requireschangesHUMAN:DJB122013-10-13 12:54:53 CDTGO:0031072 heat shock protein binding (F)PMID:23975754ECO:0000314 direct assay evidence used in manual assertion

Fig. 5 DnaJ activates ABA binding to GRP78

challenge
unacceptableHUMAN:DJB122013-10-13 12:55:54 CDTGO:0031072 heat shock protein binding (F)PMID:23975754ECO:0000314 direct assay evidence used in manual assertion

Fig. 5 DnaJ activates ABA binding to HSP70-2

challenge
updatedbyinstructor9ACTN:F8WSY72013-11-10 14:02:13 CSTGO:0031176 endo-1,4-beta-xylanase activity (F)PMID:24197520ECO:0000314 direct assay evidence used in manual assertion

Table 3: Shows increased activity against birch wood xylan vs oat spelt xylan and wheat arabinoxylan, suggesting that it is able to break down β-1,4-xylan regions lacking substitutions.

challenge
updatedbyinstructorSTRLN:Q543632013-11-10 14:31:32 CSTGO:0008170 N-methyltransferase activity (F)PMID:24166757ECO:0000314 direct assay evidence used in manual assertion

Figure 2:Plot shows rate of conversion of

N-demethyllincomycin (NDL) into lincomycin showing methyltransferase activity.

challenge
updatedbyinstructor9ACTN:E9JES02013-11-10 14:34:28 CSTGO:0008170 N-methyltransferase activity (F)PMID:24166757ECO:0000314 direct assay evidence used in manual assertion

Figure 2:Plot shows rate of conversion of N-demethyllincomycin (NDL) into lincomycin showing methyltransferase activity.

challenge
acceptableBACSU:YMDB2013-11-10 14:54:38 CSTGO:0004113 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity (F)PMID:24163345ECO:0000314 direct assay evidence used in manual assertion

Table 4: Shows kinetics of YmdB against 2'3' cyclic mononucleotides

challenge
requireschangesBACSU:YMDB2013-11-10 14:57:53 CSTGO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity (F)PMID:24163345ECO:0000314 direct assay evidence used in manual assertion

Table 4: Shows kinetics with 3'5' cyclic mononucleotides

challenge
requireschangesBACSU:YMDB2013-11-10 15:26:57 CSTGO:1902201 negative regulation of bacterial-type flagellar cell motility (P)PMID:21856853ECO:0000315 mutant phenotype evidence used in manual assertion

Fig. 1 Shows accumulation of flagellin Hag in YmdB deletion strain

challenge
requireschangesBACSU:YMDB2013-11-10 15:37:09 CSTGO:1900192 positive regulation of single-species biofilm formation (P)PMID:21856853ECO:0000315 mutant phenotype evidence used in manual assertion

Fig 2: Shows visual effects of biofilm production using a YmdB deletion mutant. YmdB deletion mutants are unable to form biofilms.

challenge

acceptable:1
unacceptable:1
requires_changes:7
flagged:0

Annotations challenged by Qdickinson

StatusAuthor,GroupPageGO Term (Aspect)ReferenceEvidenceLinksPage history

0 annotations fixed by Qdickinson