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User:Athena99

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Spring 2013

My Annotations

StatusPageDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
updatedbyinstructorHUMAN:M4K42013-02-19 20:42:03 CSTGO:0004111 creatine kinase activity (F)PMID:23207904ECO:0000314 direct assay evidence used in manual assertion

Fig 3.

challenge
updatedbyinstructorHUMAN:HEXI12013-03-05 19:24:21 CSTGO:1901798 positive regulation of signal transduction by p53 class mediator (P)PMID:22948151ECO:0000315 mutant phenotype evidence used in manual assertion

Fig 6.

challenge
acceptableLITER:PGT12013-04-08 14:32:56 CDTGO:0004337 geranyltranstransferase activity (F)PMID:19392660ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 2:The PHB geranyltransferase activities of fourteen mutant enzymes were measured using the

microsomal fraction from S. cerevisiae transformants.

challenge

acceptable:1
unacceptable:0
requires_changes:0
flagged:0

Annotations challenged by Athena99

StatusAuthor,GroupPageGO Term (Aspect)ReferenceEvidenceLinksPage history
updatedbyinstructorBennettv,
Team Viral Load Challengers
PEDV7:VEMPGO:0042025 - host cell nucleus (C)PMID:23332027ECO:0000314 direct assay evidence used in manual assertionchallengeC: 2

fixed by Athena99
updatedbyinstructorKathrynmartin,
Team M Squared
HUMAN:KILINGO:0007050 - cell cycle arrest (P)PMID:23418309ECO:0000314 direct assay evidence used in manual assertionchallengeC: 1

fixed by Athena99
updatedbyinstructorAthena99,
Team BTHO PubMed!
HUMAN:HEXI1GO:1901798 - positive regulation of signal transduction by p53 class mediator (P)PMID:22948151ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 2

fixed by Athena99
updatedbyinstructorDjgulizia,
Team Texas Aggies
MOUSE:WNT2GO:0050769 - positive regulation of neurogenesis (P)PMID:20018874ECO:0000314 direct assay evidence used in manual assertionchallengeC: 1

fixed by Athena99
updatedbyinstructorMcalisterj,
Team Legend (wait for it) DARY
HHV8P:MIR2GO:0075509 - endocytosis involved in viral entry into host cell (P)PMID:23460925ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 1

fixed by Athena99
updatedbyinstructorMcalisterj,
Team Legend (wait for it) DARY
HHV8P:MIR1GO:0039504 - suppression by virus of host adaptive immune response (P)PMID:23460925ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 1

fixed by Athena99
updatedbyinstructorMcalisterj,
Team Legend (wait for it) DARY
HHV8P:MIR2GO:0039504 - suppression by virus of host adaptive immune response (P)PMID:23460925ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 1

fixed by Athena99
updatedbyinstructorMcalisterj,
Team Legend (wait for it) DARY
HHV8P:MIR1GO:0075509 - endocytosis involved in viral entry into host cell (P)PMID:23460925ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 1

fixed by Athena99
acceptableHibbsder,
Team KEGGstands at PubMed
STRTR:CAS3GO:0004536 - deoxyribonuclease activity (F)PMID:21343909ECO:0000314 direct assay evidence used in manual assertionchallengeC: 17
correctedthroughchallengesDimitrios.Spantithos,
Team Gene Shalit
ECOK1:A1A992GO:0051271 - negative regulation of cellular component movement (P)PMID:21980417ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 1

fixed by Athena99
correctedthroughchallengesDimitrios.Spantithos,
Team Gene Shalit
ECOLW:E0IZI8GO:0030092 - obsolete regulation of flagellum assembly (P)PMID:21980417ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 1

fixed by Athena99
correctedthroughchallengesDimitrios.Spantithos,
Team Gene Shalit
ECOK1:A1A992GO:0009242 - colanic acid biosynthetic process (P)PMID:21980417ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 1

fixed by Athena99
updatedbyinstructorAcoppola,
Team CFP
DROME:Q9NGK5GO:0031594 - neuromuscular junction (C)PMID:21228178ECO:0000314 direct assay evidence used in manual assertionchallengeC: 1

fixed by Athena99
updatedbyinstructorAcoppola,
Team CFP
DROME:Q9NGK5GO:0050805 - negative regulation of synaptic transmission (P)PMID:21228178ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 5
updatedbyinstructorTheresa.Hubbell,
Team Gene Autry
DEIRA:Q9RS96GO:0047429 - nucleoside-triphosphate diphosphatase activity (F)PMID:21733847ECO:0000314 direct assay evidence used in manual assertionchallengeC: 1

fixed by Athena99
acceptablePallasbr,
Team KEGGstands at PubMed
HUMAN:TWST1GO:2000144 - positive regulation of DNA-templated transcription, initiation (P)PMID:17332325ECO:0000314 direct assay evidence used in manual assertionchallengeC: 1
acceptableMkelly,
Team CFP
XENLA:Q153D9GO:0060031 - mediolateral intercalation (P)PMID:17134691ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 1
acceptableSchmi409,
Team Proteocritics
ECOLI:PURUGO:0006164 - purine nucleotide biosynthetic process (P)PMID:8226647ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 1
requireschangesTrevornash,
Team Old Worm
?GO:1900368 - regulation of RNA interference (Table 1)PMID:14961122IMP: Inferred from Mutant Phenotype challengeC: 2
correctedthroughchallengesI.bargsley,
Team Don't be anno-hating
YEAST:RPB1GO:0035067 - negative regulation of histone acetylation (P)PMID:23401858ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 2
updatedbyinstructorDimitrios.Spantithos,
Team Gene Shalit
ECOLI:YBJNGO:1902209 - negative regulation of bacterial-type flagellum assembly (P)PMID:21980417ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 1

fixed by Athena99
updatedbyinstructorAcoppola,
Team CFP
DROME:Q9NGK5GO:0008345 - larval locomotory behavior (P)PMID:21228178ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 4

fixed by Athena99
updatedbyinstructorSinghpr4,
Team The Monstars
BRASZ:NAABGO:0051213 - dioxygenase activity (F)PMID:21498645ECO:0000314 direct assay evidence used in manual assertionchallengeC: 2

fixed by Harsharn.kaur
updatedbyinstructorSinghpr4,
Team The Monstars
BRASZ:NAACGO:0046573 - lactonohydrolase activity (F)PMID:21498645ECO:0000314 direct assay evidence used in manual assertionchallengeC: 3

fixed by Mart1202
correctedthroughchallengesKathy.mok,
Team NDSUstuds
MYCTU:P96225GO:0046467 - membrane lipid biosynthetic process (Fig 6 )PMID:23396914IMP: Inferred from Mutant Phenotype challengeC: 1

fixed by Athena99
correctedthroughchallengesKathy.mok,
Team NDSUstuds
MYCTU:P96225GO:2000145 - regulation of cell motility (Fig 5)PMID:23396914IMP: Inferred from Mutant Phenotype challengeC: 1

fixed by Athena99
correctedthroughchallengesKathy.mok,
Team NDSUstuds
MYCTU:P96225GO:0042710 - biofilm formation (Fig 5)PMID:23396914IMP: Inferred from Mutant Phenotype challengeC: 1

fixed by Athena99
correctedthroughchallengesElizabeth.bajczyk,
Team NDSUstuds
MYCTU:P96225GO:0005887 - integral component of plasma membrane (Fig. 4)PMID:23396914IMP: Inferred from Mutant Phenotype challengeC: 1

fixed by Athena99
updatedbyinstructorElizabeth.bajczyk,
Team NDSUstuds
MYCTO:L7N5I3GO:0090143 - nucleoid organization (P)PMID:23396914ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 3

fixed by Reinha81
correctedthroughchallengesReinha81,
Team Anonymous
TOBAC:Q9LW91GO:0004089 - carbonate dehydratase activity (F)PMID:12226395ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 1

fixed by Athena99
acceptableStanto81,
Team Bringin back Fanny Packs
HUMAN:INSL3GO:0090303 - positive regulation of wound healing (P)PMID:23539510ECO:0000314 direct assay evidence used in manual assertionchallengeC: 1
correctedthroughchallengesRonald.smith,
Team Ribosome
HUMAN:MK01GO:0033629 - negative regulation of cell adhesion mediated by integrin (P)PMID:23118220ECO:0000314 direct assay evidence used in manual assertionchallengeC: 2

fixed by Athena99
correctedthroughchallengesRonald.smith,
Team Ribosome
HUMAN:MK01GO:1901202 - negative regulation of extracellular matrix assembly (P)PMID:23118220ECO:0000314 direct assay evidence used in manual assertionchallengeC: 2

fixed by Athena99
updatedbyinstructorMill1856,
Team Its Miller Time
CHLTE:Q8KAB9GO:0019418 - sulfide oxidation (P)PMID:21233162ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 2
updatedbyinstructorCasano11,
Team Its in my Jeans
HHV11:ANGO:0004518 - nuclease activity (F)PMID:15994834ECO:0000314 direct assay evidence used in manual assertionchallengeC: 4
updatedbyinstructorBrianna.diehl,
Team Plasma Membrane
RAT:E2E1S0GO:0050775 - positive regulation of dendrite morphogenesis (P)PMID:20861382ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 4

fixed by Brianna.diehl
correctedthroughchallengesBarre178,
Team I know Where You Live
?GO:0048813 - dendrite morphogenesis (Figure 2 shows Rex2 knockout results in defects in dendrite morphology.)PMID:18334636IMP: Inferred from Mutant Phenotype challengeC: 1

fixed by Athena99
updatedbyinstructorFinchcha,
Team We Love Nickelback
EMEND:Q00171GO:0045893 - positive regulation of transcription, DNA-templated (P)PMID:16467464ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 3
requireschangesMegan.Bosson,
Team Amino Acid
HUMAN:TIGARGO:0070585 - protein localization to mitochondrion (P)PMID:23185017ECO:0000314 direct assay evidence used in manual assertionchallengeC: 2
updatedbyinstructorMessanyn,
Team The Knockouts
ARATH:KEA2GO:0015386 - potassium:proton antiporter activity (F)PMID:22551943ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 2

fixed by Athena99
updatedbyinstructorMegan.Bosson,
Team Amino Acid
DANRE:B9D2GO:0007163 - establishment or maintenance of cell polarity (P)PMID:21602787ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 3
updatedbyinstructorMegan.Bosson,
Team Amino Acid
DANRE:B9D2GO:0036372 - opsin transport (P)PMID:21602787ECO:0000315 mutant phenotype evidence used in manual assertionchallengeC: 4

fixed by Athena99
updatedbyinstructorBridget.bickers,
Team Endoplasmic Reticulum
9ALPH:Q2END6GO:0045892 - negative regulation of transcription, DNA-templated (P)PMID:21324502ECO:0000314 direct assay evidence used in manual assertionchallengeC: 1

25 annotations fixed by Athena99

What do the icons mean in the status column?

assessment icons.jpg