GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
Cacao
| GO:0010628 | positive regulation of gene expression | PMID:26691508 | IDA: Inferred from Direct Assay | P | ||||
| This annotation made on page: MOUSE:PO5F1 By: MABeebe (group Team Mighty Chondria) on 2018-10-02 14:17:45 CDT. | ||||||||
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| Entry Type | Challenging User,Group | Time/Date | Challenge Reason | Points/Assessment | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Challenge | EZN, Team BICH | 2018-10-23 14:01:17 CDT | The new Go Term is GO:0060261 Then an extension to the notes would be: Figure 6 then shows occupation of the promoter sequence through ChIP assays for the POU domain, class 5, transcription factor 1/Transcription Factor Oct4. | 2 | |||||||||||||||||
| Challenge | MABeebe, Team Mighty Chondria | 2018-10-23 13:57:56 CDT | Protein Name: Oct 4 Uniprot ID: P20263 PMID: 26691508 Paper name: Physical Interactions and Functional Coordination between the Core Subunits of Set1/Mll Complexes and the Reprogramming Factors GO ID: GO:0001228 (DNA-binding transcription activator activity, RNA polymerase II-specific) Evidence Code: IDA Notes: Fig. 1C and D shows that Mouse cells treated with Oct4 (a transcription factor identified in Uniprot as Pou5f1) exhibit increased mRNA levels of the genes Wdr5 and Dpy30 relative to the control. | 2 | |||||||||||||||||
| Challenge | MABeebe, Team Mighty Chondria | 2018-10-23 13:56:09 CDT | Protein Name: Oct 4 Uniprot ID: P20263 Organism: PMID: 26691508 Paper name: Physical Interactions and Functional Coordination between the Core Subunits of Set1/Mll Complexes and the Reprogramming Factors GO ID: GO:0001228 (DNA-binding transcription activator activity, RNA polymerase II-specific) Evidence Code: IDA Notes: Fig. 1C and D shows that Mouse cells treated with Oct4 (a transcription factor) exhibit increased mRNA levels of the genes Wdr5 and Dpy30 relative to the control. | None, yet. | |||||||||||||||||
| Challenge | EZN, Team BICH | 2018-10-14 23:51:56 CDT | The Annotation is actually done on the wrong protein, and should be as follows: Protein Name: POU domain, class 5, transcription factor 1; Transcription Factor Oct4 Uniprot ID: P20263 Organism: Mus musculus (Mouse) PMID: 26691508 Paper name: Physical Interactions and Functional Coordination between the Core Subunits of Set1/Mll Complexes and the Reprogramming Factors GO ID: term name: GO:0045944 Evidence Code: IDA Notes: In Figure 1, more specifically 1C, it is shown how POU domain, class 5, transcription factor 1/Transcription Factor Oct4 in Mus musculus upregulates Wdr5 and Dpy30 expression at the RNA level | 3 | |||||||||||||||||
| Private Assessment | Sandyl 27 | 2018-10-31 13:31:35 CDT | You need to be an instructor to view these notes. | Acceptable ✔ Protein ✔ Publication ✔ Qualifier ✔ Go term ✔ Evidence ✔ With/From ✔ Notes ✔ Unique/Original | |||||||||||||||||
| Private Assessment | Sandyl 27 | 2018-10-31 13:29:12 CDT | You need to be an instructor to view these notes. | Acceptable ✔ Protein ✔ Publication ✔ Qualifier ✔ Go term ✔ Evidence ✔ With/From ✔ Notes ✔ Unique/Original | |||||||||||||||||
| Public Assessment | DanielRenfro | 2018-10-30 13:23:28 CDT | This annotation has been flagged because it has been edited since last assessment
| Flagged | |||||||||||||||||
| Public Assessment | Sandyl 27 | 2018-10-25 11:40:01 CDT | To get credit for this annotation, all parts need to be fixed even if a previous challenge already corrected a part. | Requires Changes | |||||||||||||||||
| Private Assessment | Sandyl 27 | 2018-10-25 11:38:54 CDT | You need to be an instructor to view these notes. | Requires Changes ✗ Go term ✗ Notes | |||||||||||||||||
| Public Assessment | DanielRenfro | 2018-10-23 14:01:17 CDT | This annotation has been flagged because it has been challenged since last assessment | Flagged | |||||||||||||||||
| Public Assessment | DanielRenfro | 2018-10-23 13:57:56 CDT | This annotation has been flagged because it has been challenged since last assessment | Flagged | |||||||||||||||||
| Public Assessment | DanielRenfro | 2018-10-23 13:56:09 CDT | This annotation has been flagged because it has been challenged since last assessment | Flagged | |||||||||||||||||
| Private Assessment | Jrr | 2018-10-16 14:23:28 CDT | You need to be an instructor to view these notes. | Requires Changes | |||||||||||||||||
| Public Assessment | Jrr | 2018-10-16 14:14:40 CDT | To receive full points for correcting this annotation, you must include ALL the correct information in your challenge. | Requires Changes ✗ Go term | |||||||||||||||||
| Public Assessment | Jrr | 2018-10-16 14:05:11 CDT | When challenging/correcting this annotation, you must give all correct aspects of the annotation in the notes to receive points for the annotation. | Requires Changes ✗ Go term | |||||||||||||||||
| Public Assessment | DanielRenfro | 2018-10-14 23:51:56 CDT | This annotation has been flagged because it has been challenged since last assessment | Flagged | |||||||||||||||||
| Private Assessment | CRoss2008 | 2018-10-05 15:36:37 CDT | You need to be an instructor to view these notes. | Flagged ✗ Protein ✔ Publication ✔ Qualifier ✗ Go term ✔ Evidence ✔ With/From ✗ Notes ✔ Unique/Original |
