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Cacao

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GO:0050661NADP bindingPMID:6815179ISS: Inferred from Sequence Similarity UniProtKB:P00381 F
This annotation made on page: 9CAUD:A0A0K2D000
By: E63 (group Team Blue A) on 2016-04-04 07:03:18 CDT.




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Entry TypeChallenging User,GroupTime/DateChallenge ReasonPoints/Assessment
ChallengeE63,
Team Blue A
2016-03-30 16:50:43 CDT

You do not have to use IGC in this situation. IGC is used when you cannot rely solely on homology. In this case, I can rely on homology because the e value that I obtained in BLAST is low enough that there is strong homology.

1
ChallengeChensi1,
Team Red A
2016-03-30 11:32:12 CDT

Missing UniProt ID in with/from.

2
ChallengeShireen2,
Team Red A
2016-03-30 09:48:57 CDT

for the transfer annotation you must use the evidence code IGC.

0
Public
Assessment
Scaruso2016-05-09 13:52:15 CDT

This should be a transfer annotation using the SEA-PHAGES GO Ref (GO_REF 0000100) and ISS or IGC as the evidence code and the protein of interest's Uniprot ID(s) in the with/from field. Then you should have all of the information in this annotation put in the notes, including the PMID and your justification. The LACCA:DYR regular annotation needs to be corrected as well, though it should be easily done.

Unacceptable
Protein
Publication
Qualifier
Go term
Evidence
With/From
Notes
Unique/Original
Private
Assessment
JimHu2016-05-09 13:46:38 CDTYou need to be an instructor to view these notes.Unacceptable
Protein
Publication
Qualifier
Go term
Evidence
With/From
Notes
Unique/Original
Public
Assessment
DanielRenfro2016-04-04 19:03:18 CDT

This annotation has been flagged because it has been edited since last assessment

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0050661 NADP binding PMID:6815179 ISS: Inferred from Sequence Similarity UniProtKB:P00381 F Transfer annotation from gene page LACCA:DYR.

Strong sequence similarity with an E value of 2E-34. Accession #: 4DFR_A||complete
CACAO 11423

on 9CAUD:A0A0K2D000
Flagged