GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
STRCO:RS12
Contents
Species (Taxon ID) | Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145). (100226) | |
Gene Name(s) | rpsL | |
Protein Name(s) | 30S ribosomal protein S12 | |
External Links | ||
UniProt | P0A4A3 | |
EMBL | AL939121 | |
RefSeq | NP_628819.1 | |
ProteinModelPortal | P0A4A3 | |
SMR | P0A4A3 | |
STRING | 100226.SCO4659 | |
ChEMBL | CHEMBL1641336 | |
PhosSite | P11111094 | |
PRIDE | P0A4A3 | |
EnsemblBacteria | CAB81850 | |
GeneID | 1100100 | |
KEGG | sco:SCO4659 | |
PATRIC | 23739140 | |
eggNOG | COG0048 | |
HOGENOM | HOG000040063 | |
InParanoid | P0A4A3 | |
KO | K02950 | |
OMA | GTMTPRK | |
OrthoDB | EOG61ZTNF | |
PhylomeDB | P0A4A3 | |
PRO | PR:P0A4A3 | |
Proteomes | UP000001973 | |
GO | GO:0015935 GO:0019843 GO:0003735 GO:0000049 GO:0046677 GO:0006412 | |
Gene3D | 2.40.50.140 | |
HAMAP | MF_00403_B | |
InterPro | IPR012340 IPR006032 IPR005679 | |
PANTHER | PTHR11652 | |
Pfam | PF00164 | |
PIRSF | PIRSF002133 | |
PRINTS | PR01034 | |
SUPFAM | SSF50249 | |
TIGRFAMs | TIGR00981 | |
PROSITE | PS00055 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0006412 |
translation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10911 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0003735 |
structural constituent of ribosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10911 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003735 |
structural constituent of ribosome |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005840 |
ribosome |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006412 |
translation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0015935 |
small ribosomal subunit |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006412 |
translation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000085091 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0000049 |
tRNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000085091 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0019843 |
rRNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000085091 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0019843 |
rRNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005840 |
ribosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000049 |
tRNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0046677 |
response to antibiotic |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
b
r
s