GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
STAA8:SIGA
Contents
| Species (Taxon ID) | Staphylococcus aureus (strain NCTC 8325). (93061) | |
| Gene Name(s) | sigA (ECO:0000255 with HAMAP-Rule:MF_00963) (synonyms: plaC, rpoD) | |
| Protein Name(s) | RNA polymerase sigma factor SigA (ECO:0000255 with HAMAP-Rule:MF_00963) | |
| External Links | ||
| UniProt | P0A0J0 | |
| EMBL | M63177 CP000253 | |
| PIR | S34442 | |
| RefSeq | WP_001283055.1 YP_500173.1 | |
| PDB | 4G6D 4G8X 4G94 | |
| PDBsum | 4G6D 4G8X 4G94 | |
| ProteinModelPortal | P0A0J0 | |
| SMR | P0A0J0 | |
| STRING | 93061.SAOUHSC_01662 | |
| PRIDE | P0A0J0 | |
| EnsemblBacteria | ABD30737 | |
| GeneID | 3920074 | |
| KEGG | sao:SAOUHSC_01662 | |
| PATRIC | 19580705 | |
| eggNOG | ENOG4105DG1 COG0568 | |
| HOGENOM | HOG000270273 | |
| KO | K03086 | |
| OMA | DQMDEFF | |
| OrthoDB | EOG6XHC70 | |
| BioCyc | SAUR93061:GIWJ-1587-MONOMER | |
| Proteomes | UP000008816 | |
| GO | GO:0005737 GO:0003677 GO:0016987 GO:0003700 GO:0001123 | |
| Gene3D | 1.10.10.10 | |
| HAMAP | MF_00963 | |
| InterPro | IPR014284 IPR000943 IPR009042 IPR007627 IPR007624 IPR007630 IPR007127 IPR013325 IPR013324 IPR012760 IPR028630 IPR011991 | |
| Pfam | PF03979 PF00140 PF04542 PF04539 PF04545 | |
| PRINTS | PR00046 | |
| SUPFAM | SSF88659 SSF88946 | |
| TIGRFAMs | TIGR02393 TIGR02937 | |
| PROSITE | PS00715 PS00716 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:2000142 |
regulation of DNA-templated transcription, initiation |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0016987 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:2000142 |
regulation of DNA-templated transcription, initiation |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0016987 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:2000142 |
regulation of DNA-templated transcription, initiation |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0016987 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000943 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006352 |
DNA-templated transcription, initiation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000943 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000943 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0016987 |
sigma factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000184638 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0016987 |
sigma factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000184638 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0010468 |
regulation of gene expression |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000184638 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000184638 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0001123 |
transcription initiation from bacterial-type RNA polymerase promoter |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000184638 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016987 |
sigma factor activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.