GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
STAA8:LYTM
Contents
| Species (Taxon ID) | Staphylococcus aureus (strain NCTC 8325). (93061) | |
| Gene Name(s) | lytM | |
| Protein Name(s) | Glycyl-glycine endopeptidase LytM
Autolysin LytM | |
| External Links | ||
| UniProt | O33599 | |
| EMBL | L77194 CP000253 | |
| RefSeq | WP_000736798.1 YP_498843.1 | |
| PDB | 1QWY 2B0P 2B13 2B44 | |
| PDBsum | 1QWY 2B0P 2B13 2B44 | |
| DisProt | DP00352 | |
| ProteinModelPortal | O33599 | |
| SMR | O33599 | |
| STRING | 93061.SAOUHSC_00248 | |
| MEROPS | M23.013 | |
| EnsemblBacteria | ABD29423 | |
| GeneID | 23196091 3919268 | |
| KEGG | sao:SAOUHSC_00248 | |
| PATRIC | 19578104 | |
| eggNOG | COG0739 | |
| HOGENOM | HOG000279753 | |
| KO | K08259 | |
| OMA | GNGKINY | |
| OrthoDB | EOG6J1D9M | |
| BioCyc | SAUR93061:GIWJ-237-MONOMER | |
| EvolutionaryTrace | O33599 | |
| Proteomes | UP000008816 | |
| GO | GO:0005576 GO:0046872 GO:0008237 GO:0071555 GO:0009405 | |
| InterPro | IPR011055 IPR016047 | |
| Pfam | PF01551 | |
| SUPFAM | SSF51261 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
enables |
GO:0016151 |
nickel cation binding |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0030145 |
manganese ion binding |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0050897 |
cobalt ion binding |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008270 |
zinc ion binding |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0043171 |
peptide catabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004222 |
metalloendopeptidase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004222 |
metalloendopeptidase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10013 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009405 |
pathogenesis |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006508 |
proteolysis |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008237 |
metallopeptidase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005576 |
extracellular region |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008233 |
peptidase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0071555 |
cell wall organization |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Firczuk, M et al. (2005) Crystal structures of active LytM. J. Mol. Biol. 354 578-90 PubMed GONUTS page
- ↑ Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page