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This is your chance to make annotations OR challenge other team's annotations. You may also DEFEND or suggest improvements to your own annotations IF they have been challenged. Please note, although we ENCOURAGE challenges, an excess of identical challenges that do not appear to be applicable to the annotation or well thought out will be considered spam and ignored.

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SGD:ATS1

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Species (Taxon ID) Saccharomyces cerevisiae (baker's yeast) (taxon:4932)
Gene Name(s) ATS1 ( synonyms: YAL020C, FUN28, KTI13 )
Protein Name(s) Protein required for modification of wobble nucleosides in tRNA,
External Links
SGD S000000018

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0000226

microtubule cytoskeleton organization

SGD_REF:S000075265
PMID:13680156[1]

IGI: Inferred from Genetic Interaction

P

From SGD

GO:0000226

microtubule cytoskeleton organization

SGD_REF:S000075265
PMID:13680156[1]

IMP: Inferred from Mutant Phenotype

P

From SGD

GO:0002098

tRNA wobble uridine modification

SGD_REF:S000127524
PMID:18755837[2]

IMP: Inferred from Mutant Phenotype

P

From SGD

GO:0003674

molecular function

SGD_REF:S000069584

ND: No biological Data available

F

From SGD

GO:0005737

cytoplasm

SGD_REF:S000075265
PMID:13680156[1]

IPI: Inferred from Physical Interaction

C

From SGD

GO:0005737

cytoplasm

SGD_REF:S000126340
PMID:18466297[3]

IDA: Inferred from Direct Assay

C

From SGD

GO:0007017

microtubule-based process

SGD_REF:S000053617
PMID:8070652[4]

IGI: Inferred from Genetic Interaction

P

From SGD

GO:0007017

microtubule-based process

SGD_REF:S000053617
PMID:8070652[4]

ISS: Inferred from Sequence or Structural Similarity

P

From SGD

GO:0007117

budding cell bud growth

SGD_REF:S000075265
PMID:13680156[1]

IGI: Inferred from Genetic Interaction

P

From SGD

GO:0007117

budding cell bud growth

SGD_REF:S000075265
PMID:13680156[1]

IMP: Inferred from Mutant Phenotype

P

From SGD


Notes

References

See Help:References for how to manage references in GONUTS.
  1. 1.0 1.1 1.2 1.3 1.4 Shields, CM et al. (2003) Saccharomyces cerevisiae Ats1p interacts with Nap1p, a cytoplasmic protein that controls bud morphogenesis. Curr. Genet. 44 184-94 PubMed GONUTS page
  2. Huang, B et al. (2008) A genome-wide screen identifies genes required for formation of the wobble nucleoside 5-methoxycarbonylmethyl-2-thiouridine in Saccharomyces cerevisiae. RNA 14 2183-94 PubMed GONUTS page
  3. Zabel, R et al. (2008) Yeast alpha-tubulin suppressor Ats1/Kti13 relates to the Elongator complex and interacts with Elongator partner protein Kti11. Mol. Microbiol. 69 175-87 PubMed GONUTS page
  4. 4.0 4.1 Kirkpatrick, D & Solomon, F (1994) Overexpression of yeast homologs of the mammalian checkpoint gene RCC1 suppresses the class of alpha-tubulin mutations that arrest with excess microtubules. Genetics 137 381-92 PubMed GONUTS page
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