GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
SALTY:SKP
Contents
| Species (Taxon ID) | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720). (99287) | |
| Gene Name(s) | skp (synonyms: ompH) | |
| Protein Name(s) | Chaperone protein Skp
Cationic 16 kDa outer membrane protein Outer membrane protein OmpH | |
| External Links | ||
| UniProt | P0A1Z2 | |
| EMBL | J05101 AE006468 | |
| PIR | JQ0528 | |
| RefSeq | NP_459230.1 | |
| ProteinModelPortal | P0A1Z2 | |
| SMR | P0A1Z2 | |
| STRING | 99287.STM0225 | |
| PRIDE | P0A1Z2 | |
| EnsemblBacteria | AAL19189 | |
| GeneID | 1251743 | |
| KEGG | stm:STM0225 | |
| PATRIC | 32378737 | |
| HOGENOM | HOG000261755 | |
| KO | K06142 | |
| OMA | KWLYAAG | |
| OrthoDB | EOG6F297R | |
| PhylomeDB | P0A1Z2 | |
| BioCyc | SENT99287:GCTI-224-MONOMER | |
| Proteomes | UP000001014 | |
| GO | GO:0042597 | |
| InterPro | IPR005632 IPR024930 | |
| Pfam | PF03938 | |
| PIRSF | PIRSF002094 | |
| SMART | SM00935 | |
| SUPFAM | SSF111384 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0031230 |
intrinsic to cell outer membrane |
ECO:0000314 |
C |
Additional File 1 |
complete | |||||
|
involved_in |
GO:0061077 |
chaperone-mediated protein folding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10455 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0051082 |
unfolded protein binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10455 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0050821 |
protein stabilization |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10455 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0032978 |
protein insertion into membrane from inner side |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10455 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0030288 |
outer membrane-bounded periplasmic space |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10455 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0022417 |
protein maturation by protein folding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10455 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0051082 |
unfolded protein binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0042597 |
periplasmic space |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Chooneea, D et al. (2010) Elucidation of the outer membrane proteome of Salmonella enterica serovar Typhimurium utilising a lipid-based protein immobilization technique. BMC Microbiol. 10 44 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
b
o
- GO:0061077 ! obsolete chaperone-mediated protein folding
- GO:0031230 ! obsolete intrinsic component of cell outer membrane
- GO:0032978 ! obsolete protein insertion into membrane from inner side
- GO:0022417 ! obsolete protein maturation by protein folding
- GO:0030288 ! outer membrane-bounded periplasmic space
