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RAT:H33
Contents
| Species (Taxon ID) | Rattus norvegicus (Rat). (10116) | |
| Gene Name(s) | H3f3b (synonyms: H3.3b) | |
| Protein Name(s) | Histone H3.3 | |
| External Links | ||
| UniProt | P84245 | |
| EMBL | X73683 BC063159 BC078759 BC086580 BC087725 | |
| PIR | S34185 | |
| RefSeq | NP_446437.1 XP_002728089.1 XP_003752732.1 | |
| UniGene | Rn.106155 Rn.124815 Rn.198918 Rn.29857 | |
| ProteinModelPortal | P84245 | |
| SMR | P84245 | |
| BioGrid | 250653 | |
| IntAct | P84245 | |
| PaxDb | P84245 | |
| PRIDE | P84245 | |
| Ensembl | ENSRNOT00000004329 ENSRNOT00000050223 | |
| GeneID | 100361558 117056 | |
| KEGG | rno:100361558 rno:117056 | |
| CTD | 3021 | |
| RGD | 621095 | |
| eggNOG | COG2036 | |
| GeneTree | ENSGT00760000118967 | |
| HOGENOM | HOG000155290 | |
| HOVERGEN | HBG001172 | |
| InParanoid | P84245 | |
| KO | K11253 | |
| OMA | CHASMAR | |
| OrthoDB | EOG7HB5C2 | |
| PhylomeDB | P84245 | |
| TreeFam | TF314241 | |
| Reactome | REACT_194748 REACT_196232 REACT_198737 REACT_199225 REACT_203770 REACT_212012 REACT_212909 REACT_218427 REACT_223113 REACT_226234 REACT_259307 REACT_269413 REACT_269872 | |
| NextBio | 619898 | |
| Proteomes | UP000002494 UP000002494 | |
| ExpressionAtlas | P84245 | |
| Genevestigator | P84245 | |
| GO | GO:0000786 GO:0005634 GO:0003677 GO:0007420 GO:0009725 | |
| Gene3D | 1.10.20.10 | |
| InterPro | IPR009072 IPR007125 IPR000164 | |
| PANTHER | PTHR11426 | |
| Pfam | PF00125 | |
| PRINTS | PR00622 | |
| SMART | SM00428 | |
| SUPFAM | SSF47113 | |
| PROSITE | PS00322 PS00959 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0009725 |
response to hormone |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007420 |
brain development |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005575 |
cellular_component |
ECO:0000307 |
no biological data found used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003674 |
molecular_function |
ECO:0000307 |
no biological data found used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0031492 |
nucleosomal DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000152096 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000152096 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0000786 |
nucleosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0004828 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0000786 |
nucleosome |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046982 |
protein heterodimerization activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005694 |
chromosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0000786 |
nucleosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Scaturro, M et al. (1995) Posttranscriptional regulation of H1 zero and H3.3B histone genes in differentiating rat cortical neurons. Neurochem. Res. 20 969-76 PubMed GONUTS page
- ↑ Castiglia, D et al. (1994) H1(0) and H3.3B mRNA levels in developing rat brain. Neurochem. Res. 19 1531-7 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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