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RAT:D3ZT88

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Species (Taxon ID) Rattus norvegicus (Rat). (10116)
Gene Name(s) No Information Provided.
Protein Name(s) Protein Sp6 (ECO:0000313 with Ensembl:ENSRNOP00000030832)

RCG32901 (ECO:0000313 with EMBL:EDM05837.1)

External Links
UniProt D3ZT88
EMBL AABR06065459
CH473948
RefSeq NP_001102303.1
UniGene Rn.218646
Ensembl ENSRNOT00000038572
GeneID 363672
KEGG rno:363672
UCSC RGD:1306768
CTD 80320
RGD 1306768
GeneTree ENSGT00760000118984
KO K09196
OMA TEDGSWW
OrthoDB EOG7DC255
PhylomeDB D3ZT88
TreeFam TF315506
NextBio 683944
PRO PR:D3ZT88
Proteomes UP000002494
GO GO:0005634
GO:0046872
GO:0003676
GO:0008284
GO:0042481
Gene3D 3.30.160.60
InterPro IPR007087
IPR015880
IPR013087
SMART SM00355
PROSITE PS00028
PS50157

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0005829

cytosol

PMID:22676574[1]

ECO:0000314

C

Figure 1E shows AMI-Sp6 and WT were both found to a small extent in cytosol

complete
CACAO 6655

GO:0005634

nucleus

PMID:22676574[1]

ECO:0000314

C

Figure 1E shows that AMI-sp6 is also found in the nucleus

complete
CACAO 6657

part_of

GO:0005634

nucleus

PMID:22676574[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

PMID:22676574[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0006357

regulation of transcription by RNA polymerase II

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1338056
MGI:MGI:1342287
MGI:MGI:1354948
MGI:MGI:2153049
MGI:MGI:2153568
MGI:MGI:2181068
MGI:MGI:98968
PANTHER:PTN001145452
RGD:3738
UniProtKB:A0A1D8PNL1
UniProtKB:Q02446
UniProtKB:Q7RTV3
ZFIN:ZDB-GENE-021115-9

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0043364
FB:FBgn0261434
FB:FBgn0263239
MGI:MGI:1101353
MGI:MGI:1277166
MGI:MGI:1333856
MGI:MGI:1338056
MGI:MGI:1342287
MGI:MGI:1342772
MGI:MGI:1346318
MGI:MGI:1929988
MGI:MGI:1932575
MGI:MGI:2153568
MGI:MGI:95295
MGI:MGI:95296
MGI:MGI:98372
MGI:MGI:98968
PANTHER:PTN001145452
RGD:1306768
RGD:2544
RGD:3738
RGD:3741
RGD:3974
RGD:621445
RGD:621652
RGD:62389
UniProtKB:A0A0B4KHC8
UniProtKB:A0A0G2K5M1
UniProtKB:P18146
UniProtKB:P19544
UniProtKB:Q02086
UniProtKB:Q13351
UniProtKB:Q13886
UniProtKB:Q7RTV3
UniProtKB:Q8TDD2
UniProtKB:Q99612
UniProtKB:Q9UIH9
WB:WBGene00007772
WB:WBGene00012735

C

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001145452
UniProtKB:O14901
UniProtKB:Q9Y5W3
WB:WBGene00012735
ZFIN:ZDB-GENE-021115-9

F

Seeded From UniProt

complete

involved_in

GO:0042481

regulation of odontogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9ESX2
ensembl:ENSMUSP00000103248

P

Seeded From UniProt

complete

enables

GO:0003676

nucleic acid binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013087

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Muto, T et al. (2012) Novel genetic linkage of rat Sp6 mutation to Amelogenesis imperfecta. Orphanet J Rare Dis 7 34 PubMed GONUTS page
  2. 2.0 2.1 2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page