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PMID:29610759

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Citation

Raimondi, C, Jagla, B, Proux, C, Waxin, H, Gangloff, S and Arcangioli, B (2018) Molecular signature of the imprintosome complex at the mating-type locus in fission yeast. Microb Cell 5:169-183

Abstract

Genetic and molecular studies have indicated that an epigenetic imprint at , the sexual locus of fission yeast, initiates mating type switching. The polar DNA replication of generates an imprint on the Watson strand. The process by which the imprint is formed and maintained through the cell cycle remains unclear. To understand better the mechanism of imprint formation and stability, we characterized the recruitment of early players of mating type switching at the region. We found that the switch activating protein 1 (Sap1) is preferentially recruited inside the allele on a sequence () that enhances the imprint. The lysine specific demethylases, Lsd1/2, that control the replication fork pause at and the formation of the imprint are specifically drafted inside of , regardless of the allele. The CENP-B homolog, Abp1, is highly enriched next to but it is not required in the process. Additionally, we established the computational signature of the imprint. Using this signature, we show that both sides of the imprinted molecule are bound by Lsd1/2 and Sap1, suggesting a nucleoprotein protective structure defined as imprintosome.

Links

PubMed PMC5878685 Online version:10.15698/mic2018.04.623

Keywords


Significance

Annotations

Gene product Qualifier GO Term Evidence Code with/from Aspect Extension Notes Status

SCHPO:SAP1

is_active_in

GO:0000785: chromatin

ECO:0000314: direct assay evidence used in manual assertion

C

  • part_of:(CL:0002674)
  • coincident_with:(SO:0002158)

Seeded From UniProt

complete

SCHPO:SAP1

is_active_in

GO:0000785: chromatin

ECO:0000314: direct assay evidence used in manual assertion

C

  • part_of:(CL:0002674)
  • coincident_with:(SO:0001789)

Seeded From UniProt

complete

SCHPO:SAP1

enables

GO:1990837: sequence-specific double-stranded DNA binding

ECO:0000314: direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

SCHPO:ABP1

is_active_in

GO:0000785: chromatin

ECO:0000314: direct assay evidence used in manual assertion

C

  • part_of:(CL:0002674)
  • coincident_with:(PomBase:SPAC1142.03c)

Seeded From UniProt

complete

SCHPO:ABP1

is_active_in

GO:0000785: chromatin

ECO:0000314: direct assay evidence used in manual assertion

C

  • coincident_with:(SO:0001789)

Seeded From UniProt

complete

SCHPO:LSD2

is_active_in

GO:0000785: chromatin

ECO:0000314: direct assay evidence used in manual assertion

C

  • coincident_with:(SO:0001789)

Seeded From UniProt

complete

SCHPO:LSD1

is_active_in

GO:0000785: chromatin

ECO:0000314: direct assay evidence used in manual assertion

C

  • coincident_with:(SO:0001789)

Seeded From UniProt

complete

SCHPO:ABP1

part_of

GO:0000790: nuclear chromatin

ECO:0000314: direct assay evidence used in manual assertion

C

coincident_with:(SO:0001789)

Seeded From UniProt

complete

SCHPO:ABP1

part_of

GO:0000790: nuclear chromatin

ECO:0000314: direct assay evidence used in manual assertion

C

  • coincident_with:(PomBase:SPAC1142.03c)
  • part_of:(CL:0002674)

Seeded From UniProt

complete

SCHPO:SAP1

enables

GO:1990837: sequence-specific double-stranded DNA binding

ECO:0000314: direct assay evidence used in manual assertion

F

  • occurs_at:(SO:0001789)
  • occurs_in:(CL:0002674)

Seeded From UniProt

complete

SCHPO:SAP1

part_of

GO:0000790: nuclear chromatin

ECO:0000314: direct assay evidence used in manual assertion

C

  • coincident_with:(SO:0001789)
  • part_of:(CL:0002674)

Seeded From UniProt

complete

SCHPO:SAP1

part_of

GO:0000790: nuclear chromatin

ECO:0000314: direct assay evidence used in manual assertion

C

  • coincident_with:(SO:0002158)
  • part_of:(CL:0002674)

Seeded From UniProt

complete

Notes

See also

References

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