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PMID:21187014

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Citation

Liu, X, Rodermel, SR and Yu, F (2010) A var2 leaf variegation suppressor locus, SUPPRESSOR OF VARIEGATION3, encodes a putative chloroplast translation elongation factor that is important for chloroplast development in the cold. BMC Plant Biol. 10:287

Abstract

The Arabidopsis var2 mutant displays a unique green and white/yellow leaf variegation phenotype and lacks VAR2, a chloroplast FtsH metalloprotease. We are characterizing second-site var2 genetic suppressors as means to better understand VAR2 function and to study the regulation of chloroplast biogenesis.

Links

PubMed PMC3022910 Online version:10.1186/1471-2229-10-287

Keywords

ATP-Dependent Proteases/genetics; ATP-Dependent Proteases/metabolism; Alleles; Arabidopsis/genetics; Arabidopsis/metabolism; Arabidopsis Proteins/genetics; Arabidopsis Proteins/metabolism; Chloroplasts/genetics; Chloroplasts/metabolism; Cold Temperature; Immunoblotting; Membrane Proteins/genetics; Membrane Proteins/metabolism; Mutation; Peptide Elongation Factors/genetics; Peptide Elongation Factors/metabolism; Phenotype; Phylogeny; RNA, Chloroplast/genetics; RNA, Chloroplast/metabolism; RNA, Ribosomal/genetics; RNA, Ribosomal/metabolism; Reverse Transcriptase Polymerase Chain Reaction

Significance

Annotations

Gene product Qualifier GO Term Evidence Code with/from Aspect Extension Notes Status

ARATH:F4K409

involved_in

GO:0031425: chloroplast RNA processing

ECO:0000315: mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

ARATH:F4K409

located_in

GO:0009507: chloroplast

ECO:0000314: direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

ARATH:SVR3

involved_in

GO:0006364: rRNA processing

ECO:0000315: mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

ARATH:SVR3

located_in

GO:0009507: chloroplast

ECO:0000314: direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

ARATH:SVR3

involved_in

GO:0009409: response to cold

ECO:0000315: mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

ARATH:SVR3

involved_in

GO:0050821: protein stabilization

ECO:0000315: mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

ARATH:CLPR1

involved_in

GO:0009658: chloroplast organization

ECO:0000315: mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete


See also

References

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