GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
PMID:14550786
Citation |
Stennard, FA, Costa, MW, Elliott, DA, Rankin, S, Haast, SJ, Lai, D, McDonald, LP, Niederreither, K, Dolle, P, Bruneau, BG, Zorn, AM and Harvey, RP (2003) Cardiac T-box factor Tbx20 directly interacts with Nkx2-5, GATA4, and GATA5 in regulation of gene expression in the developing heart. Dev. Biol. 262:206-24 |
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Abstract |
Tbx20 is a member of the T-box transcription factor family expressed in the forming hearts of vertebrate and invertebrate embryos. We report here analysis of Tbx20 expression during murine cardiac development and assessment of DNA-binding and transcriptional properties of Tbx20 isoforms. Tbx20 was expressed in myocardium and endocardium, including high levels in endocardial cushions. cDNAs generated by alternative splicing encode at least four Tbx20 isoforms, and Tbx20a uniquely carried strong transactivation and transrepression domains in its C terminus. Isoforms with an intact T-box bound specifically to DNA sites resembling the consensus brachyury half site, although with less avidity compared with the related factor, Tbx5. Tbx20 physically interacted with cardiac transcription factors Nkx2-5, GATA4, and GATA5, collaborating to synergistically activate cardiac gene expression. Among cardiac GATA factors, there was preferential synergy with GATA5, implicated in endocardial differentiation. In Xenopus embryos, enforced expression of Tbx20a, but not Tbx20b, led to induction of mesodermal and endodermal lineage markers as well as cell migration, indicating that the long Tbx20a isoform uniquely bears functional domains that can alter gene expression and developmental behaviour in an in vivo context. We propose that Tbx20 plays an integrated role in the ancient myogenic program of the heart, and has been additionally coopted during evolution of vertebrates for endocardial cushion development. |
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Keywords |
Alternative Splicing; Animals; DNA/metabolism; DNA-Binding Proteins/metabolism; GATA4 Transcription Factor; GATA5 Transcription Factor; Gene Expression Regulation, Developmental/physiology; Heart/embryology; Homeodomain Proteins/metabolism; Mice; Mutation; Protein Isoforms; T-Box Domain Proteins/genetics; T-Box Domain Proteins/metabolism; Transcription Factors/metabolism; Xenopus; Xenopus Proteins/metabolism |
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Significance
Annotations
Gene product | Qualifier | GO Term | Evidence Code | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|
MOUSE:NKX25 |
enables |
GO:0005515: protein binding |
ECO:0000353: physical interaction evidence used in manual assertion |
UniProtKB:Q9ES03 |
F |
Seeded From UniProt |
complete | |
MOUSE:NKX25 |
located_in |
GO:0005634: nucleus |
ECO:0000314: direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | ||
MOUSE:TBX5 |
located_in |
GO:0005634: nucleus |
ECO:0000314: direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | ||
MOUSE:TBX5 |
enables |
GO:0000977: RNA polymerase II transcription regulatory region sequence-specific DNA binding |
ECO:0000314: direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | ||
MOUSE:GATA5 |
enables |
GO:0005515: protein binding |
ECO:0000353: physical interaction evidence used in manual assertion |
UniProtKB:Q9ES03 |
F |
Seeded From UniProt |
complete | |
enables |
GO:0005515: protein binding |
ECO:0000353: physical interaction evidence used in manual assertion |
UniProtKB:Q9ES03 |
F |
Seeded From UniProt |
complete | ||
MOUSE:TBX20 |
enables |
GO:0000978: RNA polymerase II cis-regulatory region sequence-specific DNA binding |
ECO:0000314: direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | ||
MOUSE:TBX20 |
enables |
GO:0001228: DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000314: direct assay evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | |
MOUSE:TBX20 |
involved_in |
GO:0045944: positive regulation of transcription by RNA polymerase II |
ECO:0000314: direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | ||
MOUSE:TBX20 |
located_in |
GO:0005634: nucleus |
ECO:0000314: direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | ||
MOUSE:TBX20 |
located_in |
GO:0005737: cytoplasm |
ECO:0000314: direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | ||
MOUSE:TBX20 |
enables |
GO:0000977: RNA polymerase II transcription regulatory region sequence-specific DNA binding |
ECO:0000314: direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | ||
MOUSE:TBX20 |
enables |
GO:0000981: DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000314: direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | ||
MOUSE:TBX20 |
enables |
GO:0001085: RNA polymerase II transcription factor binding |
ECO:0000353: physical interaction evidence used in manual assertion |
UniProtKB:P97489 |
F |
Seeded From UniProt |
complete | |
MOUSE:TBX20 |
enables |
GO:0001085: RNA polymerase II transcription factor binding |
ECO:0000353: physical interaction evidence used in manual assertion |
UniProtKB:Q08369 |
F |
Seeded From UniProt |
complete | |
MOUSE:TBX20 |
enables |
GO:0001102: RNA polymerase II activating transcription factor binding |
ECO:0000353: physical interaction evidence used in manual assertion |
UniProtKB:P42582 |
F |
Seeded From UniProt |
complete | |
involved_in |
GO:0000578: embryonic axis specification |
ECO:0000315: mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0001706: endoderm formation |
ECO:0000315: mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048370: lateral mesoderm formation |
ECO:0000315: mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
See also
References
See Help:References for how to manage references in GONUTS.
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- GO:0000977 ! RNA polymerase II transcription regulatory region sequence-specific DNA binding
- GO:0000978 ! RNA polymerase II cis-regulatory region sequence-specific DNA binding
- GO:0001085 ! RNA polymerase II transcription factor binding
- GO:0001102 ! RNA polymerase II activating transcription factor binding