GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

OCHAN:C0A1E1

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Ochrobactrum anthropi. (529)
Gene Name(s) crp/fnr (ECO:0000313 with EMBL:BAH28819.1)
Protein Name(s) Crp/Fnr family transcriptional regulator (ECO:0000313 with EMBL:EXL03328.1)

Crp/fnr family protein (ECO:0000313 with EMBL:BAH28819.1)

External Links
UniProt C0A1E1
EMBL AB490236
JENZ01000011
ProteinModelPortal C0A1E1
EnsemblBacteria EXL03328
GO GO:0005622
GO:0003677
GO:0003700
GO:0006351
Gene3D 1.10.10.10
2.60.120.10
InterPro IPR018490
IPR000595
IPR012318
IPR014710
IPR001808
IPR011991
Pfam PF00027
PRINTS PR00034
SMART SM00100
SM00419
SUPFAM SSF51206
PROSITE PS50042
PS51063

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:1900079

regulation of arginine biosynthetic process

PMID:16045618[1]

ECO:0000315

P

Figure 1: with NssR being a Crp-Fnr superfamily member, an Fnr-like binding sequence (TTAAC-N(4)-GTTAA) was found upstream of each gene at locations -40.5 to -42.5 relative to the centre of the binding sites and the transcription start point.

complete
CACAO 10727

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR012318

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR012318

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Elvers, KT et al. (2005) NssR, a member of the Crp-Fnr superfamily from Campylobacter jejuni, regulates a nitrosative stress-responsive regulon that includes both a single-domain and a truncated haemoglobin. Mol. Microbiol. 57 735-50 PubMed GONUTS page