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MOUSE:DFA20
Contents
| Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
| Gene Name(s) | Defa20 (synonyms: Defcr20) | |
| Protein Name(s) | Alpha-defensin 20
Cryptdin-4 Defensin-related cryptdin-20 | |
| External Links | ||
| UniProt | Q45VN2 | |
| EMBL | DQ103703 AK008107 AK008275 AC239604 | |
| CCDS | CCDS40273.1 | |
| RefSeq | NP_001170992.1 NP_899091.2 | |
| UniGene | Mm.327348 Mm.423382 | |
| ProteinModelPortal | Q45VN2 | |
| SMR | Q45VN2 | |
| STRING | 10090.ENSMUSP00000081055 | |
| PaxDb | Q45VN2 | |
| PRIDE | Q45VN2 | |
| Ensembl | ENSMUST00000084041 ENSMUST00000084042 | |
| GeneID | 100041890 68009 | |
| KEGG | mmu:100041890 mmu:68009 | |
| UCSC | uc009lbq.2 | |
| CTD | 68009 | |
| MGI | MGI:1915259 | |
| eggNOG | ENOG410JFE2 ENOG4111A2R | |
| GeneTree | ENSGT00840000130112 | |
| HOGENOM | HOG000233351 | |
| HOVERGEN | HBG011703 | |
| InParanoid | Q45VN2 | |
| KO | K05230 | |
| OMA | EGIMGIC | |
| PhylomeDB | Q45VN2 | |
| TreeFam | TF338414 | |
| PRO | PR:Q45VN2 | |
| Proteomes | UP000000589 | |
| CleanEx | MM_DEFCR20 | |
| GO | GO:0005615 GO:0019731 | |
| InterPro | IPR016327 IPR006080 IPR002366 | |
| PANTHER | PTHR11876 | |
| Pfam | PF00879 | |
| PIRSF | PIRSF001875 | |
| SMART | SM00048 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0051873 |
killing by host of symbiont cells |
ECO:0000314 |
P |
Figure 3. |
complete | |||||
|
involved_in |
GO:0071222 |
cellular response to lipopolysaccharide |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:94880 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0061844 |
antimicrobial humoral immune response mediated by antimicrobial peptide |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002275316 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0051673 |
membrane disruption in other organism |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:99584 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0050830 |
defense response to Gram-positive bacterium |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:94880 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0050829 |
defense response to Gram-negative bacterium |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:94880 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0019731 |
antibacterial humoral response |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1915259 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005615 |
extracellular space |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1915259 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0002227 |
innate immune response in mucosa |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002275316 |
P |
Seeded From UniProt |
complete | ||
|
acts_upstream_of_or_within |
GO:0019731 |
antibacterial humoral response |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005615 |
extracellular space |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003674 |
molecular_function |
ECO:0000307 |
no biological data found used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005576 |
extracellular region |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005615 |
extracellular space |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006952 |
defense response |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005576 |
extracellular region |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006952 |
defense response |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042742 |
defense response to bacterium |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Maemoto, A et al. (2004) Functional analysis of the alpha-defensin disulfide array in mouse cryptdin-4. J. Biol. Chem. 279 44188-96 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ 3.0 3.1 Shanahan, MT et al. (2011) Strain-specific polymorphisms in Paneth cell α-defensins of C57BL/6 mice and evidence of vestigial myeloid α-defensin pseudogenes. Infect. Immun. 79 459-73 PubMed GONUTS page
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