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HUMAN:SC6A4
Contents
Species (Taxon ID) | Homo sapiens (Human). (9606) | |
Gene Name(s) | SLC6A4 (synonyms: HTT, SERT) | |
Protein Name(s) | Sodium-dependent serotonin transporter
5HT transporter 5HTT Solute carrier family 6 member 4 | |
External Links | ||
UniProt | P31645 | |
EMBL | X70697 L05568 AY902473 EU099989 BC069484 U79746 AK308014 | |
CCDS | CCDS11256.1 | |
PIR | A47398 | |
RefSeq | NP_001036.1 | |
UniGene | Hs.134662 Hs.29792 | |
ProteinModelPortal | P31645 | |
SMR | P31645 | |
BioGrid | 112423 | |
IntAct | P31645 | |
MINT | MINT-577123 | |
STRING | 9606.ENSP00000261707 | |
BindingDB | P31645 | |
ChEMBL | CHEMBL2111346 | |
DrugBank | DB00321 DB00543 DB00182 DB00289 DB01114 DB00215 DB01242 DB00907 DB01151 DB06700 DB01191 DB06701 DB00514 DB00988 DB01142 DB00476 DB01363 DB01175 DB00472 DB00176 DB00458 DB08918 DB00408 DB00579 DB01577 DB00422 DB06148 DB04896 DB00805 DB00370 DB01149 DB00540 DB00715 DB00454 DB00191 DB00344 DB00852 DB01104 DB01105 DB06204 DB00193 DB00656 DB00726 DB00285 DB00661 DB06684 | |
GuidetoPHARMACOLOGY | 928 | |
TCDB | 2.A.22.1.1 | |
PhosphoSite | P31645 | |
DMDM | 400630 | |
PaxDb | P31645 | |
PRIDE | P31645 | |
Ensembl | ENST00000261707 ENST00000401766 | |
GeneID | 6532 | |
KEGG | hsa:6532 | |
UCSC | uc002hey.5 | |
CTD | 6532 | |
GeneCards | GC17M028521 | |
HGNC | HGNC:11050 | |
MIM | 103780 164230 182138 | |
neXtProt | NX_P31645 | |
PharmGKB | PA312 | |
eggNOG | COG0733 | |
GeneTree | ENSGT00760000118857 | |
HOGENOM | HOG000116406 | |
HOVERGEN | HBG071421 | |
InParanoid | P31645 | |
KO | K05037 | |
OMA | TSCKNSW | |
OrthoDB | EOG793B71 | |
PhylomeDB | P31645 | |
TreeFam | TF343812 | |
GeneWiki | Serotonin_transporter | |
GenomeRNAi | 6532 | |
NextBio | 25415 | |
PRO | PR:P31645 | |
Proteomes | UP000005640 | |
Bgee | P31645 | |
CleanEx | HS_HTT HS_SLC6A4 | |
ExpressionAtlas | P31645 | |
Genevestigator | P31645 | |
GO | GO:0005829 GO:0012505 GO:0010008 GO:0005887 GO:0045121 GO:0043005 GO:0005886 GO:0051015 GO:0019811 GO:0008504 GO:0017137 GO:0015222 GO:0005335 GO:0048854 GO:0071321 GO:0071300 GO:0007623 GO:0007613 GO:0015844 GO:0021941 GO:0045665 GO:0046621 GO:0032227 GO:0045787 GO:0010628 GO:0051260 GO:0051259 GO:0042493 GO:0032355 GO:0001666 GO:0007584 GO:0009636 GO:0006837 GO:0051610 GO:0035176 GO:0042713 GO:0021794 GO:0042310 | |
InterPro | IPR000175 IPR013086 | |
PANTHER | PTHR11616 | |
Pfam | PF03491 PF00209 | |
PRINTS | PR01203 PR00176 | |
PROSITE | PS00610 PS00754 PS50267 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0051610 |
serotonin uptake |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048854 |
brain morphogenesis |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0046621 |
negative regulation of organ growth |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035176 |
social behavior |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051610 |
serotonin uptake |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051610 |
serotonin uptake |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051610 |
serotonin uptake |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051610 |
serotonin uptake |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051259 |
protein complex oligomerization |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0051015 |
actin filament binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0045121 |
membrane raft |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0090067 |
regulation of thalamus size |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0017137 |
Rab GTPase binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0012505 |
endomembrane system |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0012505 |
endomembrane system |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0009636 |
response to toxic substance |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0005335 |
serotonin:sodium symporter activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051610 |
serotonin uptake |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0010414 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0051378 |
serotonin binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002481010 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0043005 |
neuron projection |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002481010 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0035969 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0005335 |
serotonin:sodium symporter activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0010414 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0015844 |
monoamine transport |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008504 |
monoamine transmembrane transporter activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0055085 |
transmembrane transport |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0015293 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006837 |
serotonin transport |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0005335 |
serotonin:sodium symporter activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001666 |
response to hypoxia |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0099154 |
serotonergic synapse |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0099056 |
integral component of presynaptic membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0099055 |
integral component of postsynaptic membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071321 |
cellular response to cGMP |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071300 |
cellular response to retinoic acid |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051610 |
serotonin uptake |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051260 |
protein homooligomerization |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051259 |
protein complex oligomerization |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0051015 |
actin filament binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045665 |
negative regulation of neuron differentiation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0045121 |
membrane raft |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0043005 |
neuron projection |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0042803 |
protein homodimerization activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0042713 |
sperm ejaculation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0042493 |
response to drug |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0042310 |
vasoconstriction |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032355 |
response to estradiol |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032227 |
negative regulation of synaptic transmission, dopaminergic |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0021941 |
negative regulation of cerebellar granule cell precursor proliferation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0019811 |
cocaine binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0017075 |
syntaxin-1 binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0017022 |
myosin binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0014064 |
positive regulation of serotonin secretion |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0012505 |
endomembrane system |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010033 |
response to organic substance |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007623 |
circadian rhythm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007613 |
memory |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007584 |
response to nutrient |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007420 |
brain development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P31652 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071310 |
cellular response to organic substance |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q60857 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051610 |
serotonin uptake |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q60857 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0050998 |
nitric-oxide synthase binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q60857 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048854 |
brain morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q60857 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0046621 |
negative regulation of organ growth |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q60857 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045787 |
positive regulation of cell cycle |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q60857 |
P |
Seeded From UniProt |
complete | ||
GO:0051610 |
serotonin uptake |
ECO:0000315 |
P |
Figure 2 shows the antagonism of cocaine in uptake assays. |
complete | |||||
involved_in |
GO:0035176 |
social behavior |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q60857 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010628 |
positive regulation of gene expression |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q60857 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006837 |
serotonin transport |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q60857 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0005328 |
neurotransmitter:sodium symporter activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005335 |
serotonin:sodium symporter activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005887 |
integral component of plasma membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006836 |
neurotransmitter transport |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042136 |
neurotransmitter biosynthetic process |
Reactome:R-HSA-112311 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
Reactome:R-HSA-444008 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0005335 |
serotonin:sodium symporter activity |
Reactome:R-HSA-444008 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005768 |
endosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006836 |
neurotransmitter transport |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0015293 |
symporter activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0010008 |
endosome membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0012505 |
endomembrane system |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Ramamoorthy, S et al. (1993) Antidepressant- and cocaine-sensitive human serotonin transporter: molecular cloning, expression, and chromosomal localization. Proc. Natl. Acad. Sci. U.S.A. 90 2542-6 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Müller, HK et al. (2006) Subcellular redistribution of the serotonin transporter by secretory carrier membrane protein 2. J. Biol. Chem. 281 28901-9 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 Ahmed, BA et al. (2008) Serotonin transamidates Rab4 and facilitates its binding to the C terminus of serotonin transporter. J. Biol. Chem. 283 9388-98 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 Brenner, B et al. (2007) Plasma serotonin levels and the platelet serotonin transporter. J. Neurochem. 102 206-15 PubMed GONUTS page
- ↑ 5.0 5.1 Qian, Y et al. (1997) Protein kinase C activation regulates human serotonin transporters in HEK-293 cells via altered cell surface expression. J. Neurosci. 17 45-57 PubMed GONUTS page
- ↑ Young, KA et al. (2008) Major depression, 5HTTLPR genotype, suicide and antidepressant influences on thalamic volume. Br J Psychiatry 192 285-9 PubMed GONUTS page
- ↑ Flach, CF et al. (2007) Differential expression of intestinal membrane transporters in cholera patients. FEBS Lett. 581 3183-8 PubMed GONUTS page
- ↑ 8.0 8.1 8.2 8.3 8.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ 9.0 9.1 Jiang, W et al. (2005) IRIP, a new ischemia/reperfusion-inducible protein that participates in the regulation of transporter activity. Mol. Cell. Biol. 25 6496-508 PubMed GONUTS page
c
e
m
n
- GO:0021941 ! negative regulation of cerebellar granule cell precursor proliferation
- GO:0032227 ! negative regulation of synaptic transmission, dopaminergic
- GO:0046621 ! negative regulation of organ growth
- GO:0045665 ! negative regulation of neuron differentiation
- GO:0043005 ! neuron projection
- GO:0005328 ! neurotransmitter:sodium symporter activity
- GO:0006836 ! neurotransmitter transport
- GO:0050998 ! nitric-oxide synthase binding
o
- GO:0071310 ! obsolete cellular response to organic substance
- GO:0099056 ! obsolete integral component of presynaptic membrane
- GO:0099055 ! obsolete integral component of postsynaptic membrane
- GO:0042136 ! obsolete neurotransmitter biosynthetic process
- GO:0010033 ! obsolete response to organic substance
p
- GO:0005886 ! plasma membrane
- GO:0014064 ! positive regulation of serotonin secretion
- GO:0045787 ! positive regulation of cell cycle
- GO:0010628 ! positive regulation of gene expression
- Primates
- GO:0051259 ! protein complex oligomerization
- GO:0051260 ! protein homooligomerization
- GO:0042803 ! protein homodimerization activity
r
s
- GO:0099154 ! serotonergic synapse
- GO:0005335 ! serotonin:sodium:chloride symporter activity
- GO:0051378 ! serotonin binding
- GO:0006837 ! serotonin transport
- GO:0051610 ! serotonin uptake
- GO:0035176 ! social behavior
- GO:0042713 ! sperm ejaculation
- GO:0015293 ! symporter activity
- GO:0017075 ! syntaxin-1 binding