GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

ECOLI:ULAF

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Escherichia coli (strain K12). (83333)
Gene Name(s) ulaF (ECO:0000255 with HAMAP-Rule:MF_01952) (synonyms: sgaE, yjfX)
Protein Name(s) L-ribulose-5-phosphate 4-epimerase UlaF (ECO:0000255 with HAMAP-Rule:MF_01952)

L-ascorbate utilization protein F (ECO:0000255 with HAMAP-Rule:MF_01952) Phosphoribulose isomerase (ECO:0000255 with HAMAP-Rule:MF_01952)

External Links
UniProt P39306
EMBL U14003
U00096
AP009048
PIR S56423
RefSeq NP_418619.1
YP_492340.1
ProteinModelPortal P39306
SMR P39306
DIP DIP-10868N
IntAct P39306
MINT MINT-1288465
STRING 511145.b4198
EnsemblBacteria AAC77155
BAE78199
GeneID 12933722
948711
KEGG ecj:Y75_p4084
eco:b4198
PATRIC 32123971
EchoBASE EB2391
EcoGene EG12498
eggNOG COG0235
HOGENOM HOG000218183
InParanoid P39306
KO K03077
OMA WRPSSDT
OrthoDB EOG6358F1
PhylomeDB P39306
BioCyc EcoCyc:G7860-MONOMER
ECOL316407:JW4156-MONOMER
MetaCyc:G7860-MONOMER
UniPathway UPA00263
PRO PR:P39306
Proteomes UP000000318
UP000000625
Genevestigator P39306
GO GO:0008742
GO:0008270
GO:0019854
GO:0019852
Gene3D 3.40.225.10
HAMAP MF_01952
InterPro IPR001303
IPR023499
Pfam PF00596
SMART SM01007
SUPFAM SSF53639

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0008270

zinc ion binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P08203

F

Seeded From UniProt

complete

involved_in

GO:0019323

pentose catabolic process

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG12287
PANTHER:PTN000513089

P

Seeded From UniProt

complete

enables

GO:0016832

aldehyde-lyase activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10348
PANTHER:PTN000513089

F

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10055
PANTHER:PTN000513089

C

Seeded From UniProt

complete

involved_in

GO:0019852

L-ascorbic acid metabolic process

PMID:14996803[2]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0008742

L-ribulose-phosphate 4-epimerase activity

PMID:11741871[3]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0008742

L-ribulose-phosphate 4-epimerase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR023499

F

Seeded From UniProt

complete

enables

GO:0008742

L-ribulose-phosphate 4-epimerase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:5.1.3.4

F

Seeded From UniProt

complete

involved_in

GO:0019852

L-ascorbic acid metabolic process

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000087122

P

Seeded From UniProt

complete

enables

GO:0008270

zinc ion binding

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000087122

F

Seeded From UniProt

complete

enables

GO:0008742

L-ribulose-phosphate 4-epimerase activity

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000087122

F

Seeded From UniProt

complete

involved_in

GO:0005975

carbohydrate metabolic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0119

P

Seeded From UniProt

complete

enables

GO:0016853

isomerase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0413

F

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

involved_in

GO:0019854

L-ascorbic acid catabolic process

GO_REF:0000041

ECO:0000322

imported manually asserted information used in automatic assertion

UniPathway:UPA00263

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  2. Campos, E et al. (2004) Regulation of expression of the divergent ulaG and ulaABCDEF operons involved in LaAscorbate dissimilation in Escherichia coli. J. Bacteriol. 186 1720-8 PubMed GONUTS page
  3. Yew, WS & Gerlt, JA (2002) Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons. J. Bacteriol. 184 302-6 PubMed GONUTS page