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ECOLI:TRMH
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | trmH (synonyms: spoU) | |
| Protein Name(s) | tRNA (guanosine(18)-2'-O)-methyltransferase
tRNA [Gm18] methyltransferase | |
| External Links | ||
| UniProt | P0AGJ2 | |
| EMBL | M24503 L10328 U00096 AP009048 | |
| PIR | JV0043 | |
| RefSeq | NP_418108.1 YP_491783.1 | |
| ProteinModelPortal | P0AGJ2 | |
| SMR | P0AGJ2 | |
| DIP | DIP-35977N | |
| IntAct | P0AGJ2 | |
| STRING | 511145.b3651 | |
| PaxDb | P0AGJ2 | |
| PRIDE | P0AGJ2 | |
| EnsemblBacteria | AAC76675 BAE77642 | |
| GeneID | 12933575 948161 | |
| KEGG | ecj:Y75_p3523 eco:b3651 | |
| PATRIC | 32122789 | |
| EchoBASE | EB0960 | |
| EcoGene | EG10967 | |
| eggNOG | COG0566 | |
| HOGENOM | HOG000285175 | |
| InParanoid | P0AGJ2 | |
| KO | K00556 | |
| OMA | VHAVWPT | |
| OrthoDB | EOG6GBMDM | |
| PhylomeDB | P0AGJ2 | |
| BioCyc | EcoCyc:EG10967-MONOMER ECOL316407:JW3626-MONOMER MetaCyc:EG10967-MONOMER | |
| PRO | PR:P0AGJ2 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P0AGJ2 | |
| GO | GO:0005737 GO:0003723 GO:0009020 GO:0002938 GO:0030488 | |
| Gene3D | 3.40.1280.10 | |
| InterPro | IPR029028 IPR022724 IPR001537 IPR029026 | |
| Pfam | PF12105 PF00588 | |
| SUPFAM | SSF75217 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
enables |
GO:0009020 |
tRNA (guanosine-2'-O-)-methyltransferase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10967 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0002938 |
tRNA guanine ribose methylation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10967 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0009020 |
tRNA (guanosine-2'-O-)-methyltransferase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0009020 |
tRNA (guanosine-2'-O-)-methyltransferase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0002938 |
tRNA guanine ribose methylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006396 |
RNA processing |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008168 |
methyltransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008173 |
RNA methyltransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0009020 |
tRNA (guanosine-2'-O-)-methyltransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0030488 |
tRNA methylation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0009020 |
tRNA (guanosine-2'-O-)-methyltransferase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000049 |
tRNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000293450 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0002938 |
tRNA guanine ribose methylation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000293450 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0009020 |
tRNA (guanosine-2'-O-)-methyltransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000293450 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0030488 |
tRNA methylation |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008033 |
tRNA processing |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008168 |
methyltransferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000049 |
tRNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0032259 |
methylation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Persson, BC et al. (1997) The spoU gene of Escherichia coli, the fourth gene of the spoT operon, is essential for tRNA (Gm18) 2'-O-methyltransferase activity. Nucleic Acids Res. 25 4093-7 PubMed GONUTS page
- ↑ Ochi, A et al. (2013) The catalytic domain of topological knot tRNA methyltransferase (TrmH) discriminates between substrate tRNA and nonsubstrate tRNA via an induced-fit process. J. Biol. Chem. 288 25562-74 PubMed GONUTS page
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