GONUTS has been updated to MW1.29.2. Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

DROME:STC

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Drosophila melanogaster (Fruit fly). (7227)
Gene Name(s) stc
Protein Name(s) Protein shuttle craft
External Links
UniProt P40798
EMBL U09306
AE014134
AE014134
AF145679
PIR T13938
T44598
RefSeq NP_476598.1
NP_476599.1
UniGene Dm.7818
ProteinModelPortal P40798
BioGrid 60906
IntAct P40798
MINT MINT-279983
PaxDb P40798
PRIDE P40798
EnsemblMetazoa FBtr0080705
GeneID 34888
KEGG dme:Dmel_CG3647
CTD 34888
FlyBase FBgn0001978
eggNOG NOG12793
GeneTree ENSGT00400000022083
InParanoid P40798
KO K12236
OMA CTITWAS
OrthoDB EOG7NCV2M
PhylomeDB P40798
GenomeRNAi 34888
NextBio 790717
PRO PR:P40798
Proteomes UP000000803
Bgee P40798
ExpressionAtlas P40798
GO GO:0005634
GO:0003677
GO:0003723
GO:0003700
GO:0008270
GO:0006355
GO:0006351
Gene3D 3.30.1370.50
InterPro IPR001374
IPR019786
IPR000967
IPR001841
Pfam PF01424
PF01422
SMART SM00393
SM00184
SM00438
SUPFAM SSF82708
PROSITE PS51061
PS50089

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0000122

negative regulation of transcription from RNA polymerase II promoter

GO_REF:0000033

IBA: Inferred from Biological aspect of Ancestor

PANTHER:PTN000270870

P

Seeded From UniProt

complete

GO:0000977

RNA polymerase II regulatory region sequence-specific DNA binding

GO_REF:0000033

IBA: Inferred from Biological aspect of Ancestor

PANTHER:PTN000270822

F

Seeded From UniProt

complete

GO:0001078

transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding

GO_REF:0000033

IBA: Inferred from Biological aspect of Ancestor

PANTHER:PTN000270822

F

Seeded From UniProt

complete

GO:0003676

nucleic acid binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001374

F

Seeded From UniProt

complete

GO:0003677

DNA binding

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

GO:0003700

transcription factor activity, sequence-specific DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000967

F

Seeded From UniProt

complete

GO:0003700

transcription factor activity, sequence-specific DNA binding

PMID:8524296[1]

ISS: Inferred from Sequence or Structural Similarity

HGNC:7803

F

Seeded From UniProt

complete

GO:0003723

RNA binding

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0694

F

Seeded From UniProt

complete

GO:0005634

nucleus

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000967

C

Seeded From UniProt

complete

GO:0005634

nucleus

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0539

C

Seeded From UniProt

complete

GO:0005634

nucleus

GO_REF:0000039

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

GO:0005634

nucleus

PMID:10471707[2]

ISS: Inferred from Sequence or Structural Similarity

C

Seeded From UniProt

Missing: with/from

GO:0005634

nucleus

PMID:8524296[1]

IDA: Inferred from Direct Assay

C

Seeded From UniProt

complete

GO:0006351

transcription, DNA-templated

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0804

P

Seeded From UniProt

complete

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000967

P

Seeded From UniProt

complete

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0805

P

Seeded From UniProt

complete

GO:0006355

regulation of transcription, DNA-templated

PMID:10471707[2]

ISS: Inferred from Sequence or Structural Similarity

P

Seeded From UniProt

Missing: with/from

GO:0006366

transcription from RNA polymerase II promoter

GO_REF:0000033

IBA: Inferred from Biological aspect of Ancestor

PANTHER:PTN000270822

P

Seeded From UniProt

complete

GO:0008270

zinc ion binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000967
InterPro:IPR001841

F

Seeded From UniProt

complete

GO:0008270

zinc ion binding

PMID:21912646[3]

ISM: Inferred from Sequence Model

F

Seeded From UniProt

Missing: with/from

GO:0046872

metal ion binding

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Stroumbakis, ND et al. (1996) A homolog of human transcription factor NF-X1 encoded by the Drosophila shuttle craft gene is required in the embryonic central nervous system. Mol. Cell. Biol. 16 192-201 PubMed GONUTS page
  2. 2.0 2.1 Ashburner, M et al. (1999) An exploration of the sequence of a 2.9-Mb region of the genome of Drosophila melanogaster: the Adh region. Genetics 153 179-219 PubMed GONUTS page
  3. Ying, M et al. (2011) Comprehensively surveying structure and function of RING domains from Drosophila melanogaster. PLoS ONE 6 e23863 PubMed GONUTS page