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DROME:RNP4F
Contents
| Species (Taxon ID) | Drosophila melanogaster (Fruit fly). (7227) | |
| Gene Name(s) | Rnp4F (ECO:0000312 with EMBL:AAF46022.1) (synonyms: 4f-rnp (ECO:0000312 with EMBL:CAA75535.1)) | |
| Protein Name(s) | RNA-binding protein 4F | |
| External Links | ||
| UniProt | Q9W4D2 | |
| EMBL | Y15249 Y15250 Y15251 AE014298 AE014298 AY061395 DQ269487 DQ269488 DQ269489 DQ269490 DQ269491 DQ272384 | |
| RefSeq | NP_001096883.3 NP_001096884.1 NP_511047.2 NP_996353.1 | |
| UniGene | Dm.2995 | |
| ProteinModelPortal | Q9W4D2 | |
| SMR | Q9W4D2 | |
| BioGrid | 57958 | |
| IntAct | Q9W4D2 | |
| PaxDb | Q9W4D2 | |
| PRIDE | Q9W4D2 | |
| EnsemblMetazoa | FBtr0070752 FBtr0070753 FBtr0112876 | |
| GeneID | 31448 | |
| KEGG | dme:Dmel_CG3312 | |
| CTD | 31448 | |
| FlyBase | FBgn0014024 | |
| eggNOG | NOG321927 | |
| GeneTree | ENSGT00730000111098 | |
| InParanoid | Q9W4D2 | |
| OMA | LWAQVEY | |
| OrthoDB | EOG72ZCDB | |
| PhylomeDB | Q9W4D2 | |
| GenomeRNAi | 31448 | |
| NextBio | 773694 | |
| PRO | PR:Q9W4D2 | |
| Proteomes | UP000000803 | |
| Bgee | Q9W4D2 | |
| GO | GO:0005737 GO:0003729 GO:0000166 GO:0007417 GO:0006396 | |
| Gene3D | 3.30.70.330 | |
| InterPro | IPR003107 IPR008669 IPR012677 IPR000504 | |
| Pfam | PF05391 PF00076 | |
| SMART | SM00386 SM00360 | |
| PROSITE | PS50102 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0061574 |
ASAP complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000397856 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0008380 |
RNA splicing |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0037707 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000397856 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1858230 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000398 |
mRNA splicing, via spliceosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000397856 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000381 |
regulation of alternative mRNA splicing, via spliceosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000397856 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0007417 |
central nervous system development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003729 |
mRNA binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
Missing: with/from | |||
|
enables |
GO:0003676 |
nucleic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006396 |
RNA processing |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007275 |
multicellular organism development |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Chen, J et al. (2007) Alternative splicing of an rnp-4f mRNA isoform retaining an evolutionarily-conserved 5'-UTR intronic element is developmentally regulated and shown via RNAi to be essential for normal central nervous system development in Drosophila melanogaster. Gene 399 91-104 PubMed GONUTS page
- ↑ Lasko, P (2000) The drosophila melanogaster genome: translation factors and RNA binding proteins. J. Cell Biol. 150 F51-6 PubMed GONUTS page
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