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DROME:RNP4F

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Species (Taxon ID) Drosophila melanogaster (Fruit fly). (7227)
Gene Name(s) Rnp4F (ECO:0000312 with EMBL:AAF46022.1) (synonyms: 4f-rnp (ECO:0000312 with EMBL:CAA75535.1))
Protein Name(s) RNA-binding protein 4F
External Links
UniProt Q9W4D2
EMBL Y15249
Y15250
Y15251
AE014298
AE014298
AY061395
DQ269487
DQ269488
DQ269489
DQ269490
DQ269491
DQ272384
RefSeq NP_001096883.3
NP_001096884.1
NP_511047.2
NP_996353.1
UniGene Dm.2995
ProteinModelPortal Q9W4D2
SMR Q9W4D2
BioGrid 57958
IntAct Q9W4D2
PaxDb Q9W4D2
PRIDE Q9W4D2
EnsemblMetazoa FBtr0070752
FBtr0070753
FBtr0112876
GeneID 31448
KEGG dme:Dmel_CG3312
CTD 31448
FlyBase FBgn0014024
eggNOG NOG321927
GeneTree ENSGT00730000111098
InParanoid Q9W4D2
OMA LWAQVEY
OrthoDB EOG72ZCDB
PhylomeDB Q9W4D2
GenomeRNAi 31448
NextBio 773694
PRO PR:Q9W4D2
Proteomes UP000000803
Bgee Q9W4D2
GO GO:0005737
GO:0003729
GO:0000166
GO:0007417
GO:0006396
Gene3D 3.30.70.330
InterPro IPR003107
IPR008669
IPR012677
IPR000504
Pfam PF05391
PF00076
SMART SM00386
SM00360
PROSITE PS50102

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0000166

nucleotide binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR012677

F

Seeded From UniProt

complete

GO:0003676

nucleic acid binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000504

F

Seeded From UniProt

complete

GO:0003723

RNA binding

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0694

F

Seeded From UniProt

complete

GO:0003729

mRNA binding

PMID:10908586[1]

ISS: Inferred from Sequence or Structural Similarity

F

Seeded From UniProt

Missing: with/from

GO:0005622

intracellular

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR003107

C

Seeded From UniProt

complete

GO:0005737

cytoplasm

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0963

C

Seeded From UniProt

complete

GO:0005737

cytoplasm

GO_REF:0000039

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

GO:0006396

RNA processing

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR003107

P

Seeded From UniProt

complete

GO:0007275

multicellular organismal development

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0217

P

Seeded From UniProt

complete

GO:0007417

central nervous system development

PMID:17582706[2]

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Lasko, P (2000) The drosophila melanogaster genome: translation factors and RNA binding proteins. J. Cell Biol. 150 F51-6 PubMed GONUTS page
  2. Chen, J et al. (2007) Alternative splicing of an rnp-4f mRNA isoform retaining an evolutionarily-conserved 5'-UTR intronic element is developmentally regulated and shown via RNAi to be essential for normal central nervous system development in Drosophila melanogaster. Gene 399 91-104 PubMed GONUTS page