GONUTS has been updated to MW1.29.2. Most things seem to be working but be sure to report problems.

It is now the 2nd CHALLENGE Period for CACAO Phage Hunters S2018! It will end on Monday July 16, 2018 at 05:59 pm CDT
This is your chance to challenge other team's annotations. You may also DEFEND or suggest improvements to your own annotations IF they have been challenged. Please note, although we ENCOURAGE challenges, an excess of identical challenges that do not appear to be applicable to the annotation or well thought out will be considered spam and ignored.

Have any questions? Please email us at ecoliwiki@gmail.com

DROME:LCP5

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Drosophila melanogaster (Fruit fly). (7227)
Gene Name(s) Lcp65Ab2 (synonyms: DCP3-beta, Lcp5)
Protein Name(s) Larval cuticle protein 5

Larval cuticle protein V

External Links
UniProt P92192
EMBL U81550
U84746
U84747
AE014296
AE014296
AY071366
RefSeq NP_524814.2
NP_788469.1
UniGene Dm.20808
Dm.33352
PaxDb P92192
PRIDE P92192
EnsemblMetazoa FBtr0076992
FBtr0076994
GeneID 48381
48382
KEGG dme:Dmel_CG18773
dme:Dmel_CG32400
UCSC CG18773-RA
CTD 48381
48382
FlyBase FBgn0020644
FBgn0020643
eggNOG NOG250825
GeneTree ENSGT00530000064111
InParanoid P92192
OMA KFTITYV
OrthoDB EOG72JWJ7
PhylomeDB P92192
NextBio 839370
Proteomes UP000000803
ExpressionAtlas P92192
GO GO:0031012
GO:0005576
GO:0008010
GO:0040003
GO:0008363
InterPro IPR000618
Pfam PF00379
PROSITE PS51155

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0005576

extracellular region

PMID:9654737[1]

NAS: Non-traceable Author Statement

C

Seeded From UniProt

complete

GO:0008010

structural constituent of chitin-based larval cuticle

PMID:17628275[2]

ISM: Inferred from Sequence Model

F

Seeded From UniProt

Missing: with/from

GO:0008010

structural constituent of chitin-based larval cuticle

PMID:9383064[3]

ISS: Inferred from Sequence or Structural Similarity

F

Seeded From UniProt

Missing: with/from

GO:0008010

structural constituent of chitin-based larval cuticle

PMID:9654737[1]

NAS: Non-traceable Author Statement

F

Seeded From UniProt

complete

GO:0008363

larval chitin-based cuticle development

PMID:9654737[1]

NAS: Non-traceable Author Statement

P

Seeded From UniProt

complete

GO:0031012

extracellular matrix

PMID:17628275[2]

ISM: Inferred from Sequence Model

C

Seeded From UniProt

Missing: with/from

GO:0040003

chitin-based cuticle development

PMID:17628275[2]

ISM: Inferred from Sequence Model

P

Seeded From UniProt

Missing: with/from

GO:0042302

structural constituent of cuticle

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000618

F

Seeded From UniProt

complete

GO:0042302

structural constituent of cuticle

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0193

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Charles, JP et al. (1998) Identification of proteins and developmental expression of RNAs encoded by the 65A cuticle protein gene cluster in Drosophila melanogaster. Insect Biochem. Mol. Biol. 28 131-8 PubMed GONUTS page
  2. 2.0 2.1 2.2 Karouzou, MV et al. (2007) Drosophila cuticular proteins with the R&R Consensus: annotation and classification with a new tool for discriminating RR-1 and RR-2 sequences. Insect Biochem. Mol. Biol. 37 754-60 PubMed GONUTS page
  3. Charles, JP et al. (1997) A cluster of cuticle protein genes of Drosophila melanogaster at 65A: sequence, structure and evolution. Genetics 147 1213-24 PubMed GONUTS page