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DROME:CO4A1

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Species (Taxon ID) Drosophila melanogaster (Fruit fly). (7227)
Gene Name(s) Cg25C (synonyms: DCg1)
Protein Name(s) Collagen alpha-1(IV) chain
External Links
UniProt P08120
EMBL J02727
M23704
M96575
AE014134
AE014134
AE014134
V00200
M28334
PIR A31893
RefSeq NP_723044.1
NP_723045.1
NP_723046.1
UniGene Dm.5178
ProteinModelPortal P08120
SMR P08120
BioGrid 59908
DIP DIP-59819N
IntAct P08120
MINT MINT-1738460
STRING 7227.FBpp0078641
PaxDb P08120
PRIDE P08120
EnsemblMetazoa FBtr0079001
FBtr0079002
FBtr0079003
GeneID 33727
KEGG dme:Dmel_CG4145
CTD 33727
FlyBase FBgn0000299
eggNOG NOG12793
GeneTree ENSGT00770000120455
InParanoid P08120
KO K06237
OMA PACASET
OrthoDB EOG7RZ5P3
PhylomeDB P08120
Reactome REACT_180755
REACT_215998
ChiTaRS Cg25C
GenomeRNAi 33727
NextBio 784979
PRO PR:P08120
Proteomes UP000000803
Bgee P08120
ExpressionAtlas P08120
GO GO:0005587
GO:0005201
GO:0007391
GO:0035848
Gene3D 2.170.240.10
InterPro IPR016187
IPR008160
IPR001442
Pfam PF01413
PF01391
SMART SM00111
SUPFAM SSF56436
PROSITE PS51403

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0005201

extracellular matrix structural constituent

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001442

F

Seeded From UniProt

complete

GO:0005576

extracellular region

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0964

C

Seeded From UniProt

complete

GO:0005578

proteinaceous extracellular matrix

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0272

C

Seeded From UniProt

complete

GO:0005581

collagen trimer

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001442

C

Seeded From UniProt

complete

GO:0005581

collagen trimer

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0176

C

Seeded From UniProt

complete

GO:0005587

collagen type IV trimer

PMID:10449347[1]

NAS: Non-traceable Author Statement

C

Seeded From UniProt

complete

GO:0005587

collagen type IV trimer

PMID:10908592[2]

NAS: Non-traceable Author Statement

C

Seeded From UniProt

complete

GO:0005587

collagen type IV trimer

PMID:3017484[3]

NAS: Non-traceable Author Statement

C

Seeded From UniProt

complete

GO:0005587

collagen type IV trimer

PMID:7760738[4]

TAS: Traceable Author Statement

C

Seeded From UniProt

complete

GO:0005604

basement membrane

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0084

C

Seeded From UniProt

complete

GO:0005604

basement membrane

GO_REF:0000039

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0025

C

Seeded From UniProt

complete

GO:0007391

dorsal closure

PMID:10449347[1]

TAS: Traceable Author Statement

P

Seeded From UniProt

complete

GO:0035848

oviduct morphogenesis

PMID:22037604[5]

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

complete

GO:0055013

cardiac muscle cell development

PMID:24935095[6]

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Noselli, S & Agnès, F (1999) Roles of the JNK signaling pathway in Drosophila morphogenesis. Curr. Opin. Genet. Dev. 9 466-72 PubMed GONUTS page
  2. Hynes, RO & Zhao, Q (2000) The evolution of cell adhesion. J. Cell Biol. 150 F89-96 PubMed GONUTS page
  3. Le Parco, Y et al. (1986) Characterization and expression of collagen-like genes in Drosophila melanogaster. Biol. Cell 56 217-26 PubMed GONUTS page
  4. Fessler, LI et al. (1994) Drosophila extracellular matrix. Meth. Enzymol. 245 271-94 PubMed GONUTS page
  5. Kelemen-Valkony, I et al. (2012) Drosophila basement membrane collagen col4a1 mutations cause severe myopathy. Matrix Biol. 31 29-37 PubMed GONUTS page
  6. Hollfelder, D et al. (2014) Distinct functions of the laminin β LN domain and collagen IV during cardiac extracellular matrix formation and stabilization of alary muscle attachments revealed by EMS mutagenesis in Drosophila. BMC Dev. Biol. 14 26 PubMed GONUTS page