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DANRE:VGL2A
Contents
| Species (Taxon ID) | Danio rerio (Zebrafish) (Brachydanio rerio). (7955) | |
| Gene Name(s) | slc17a6b (synonyms: blu, slc17a6, vglut2.1, vglut2a) | |
| Protein Name(s) | Vesicular glutamate transporter 2.1
Protein blumenkohl Solute carrier family 17 member 6-B Vesicular glutamate transporter 2-A | |
| External Links | ||
| UniProt | Q5W8I8 | |
| EMBL | AB183386 AL627170 BC162508 | |
| RefSeq | NP_001122293.1 | |
| UniGene | Dr.37029 | |
| ProteinModelPortal | Q5W8I8 | |
| STRING | 7955.ENSDARP00000090645 | |
| Ensembl | ENSDART00000099872 | |
| GeneID | 100149756 | |
| KEGG | dre:100149756 | |
| CTD | 100149756 | |
| ZFIN | ZDB-GENE-030616-554 | |
| eggNOG | COG0477 | |
| GeneTree | ENSGT00760000119079 | |
| HOGENOM | HOG000230812 | |
| HOVERGEN | HBG008834 | |
| InParanoid | Q5W8I8 | |
| KO | K12302 | |
| OMA | MHGHVVI | |
| OrthoDB | EOG789C9Z | |
| PhylomeDB | Q5W8I8 | |
| TreeFam | TF313535 | |
| NextBio | 20793377 | |
| PRO | PR:Q5W8I8 | |
| Proteomes | UP000000437 | |
| Bgee | Q5W8I8 | |
| GO | GO:0030054 GO:0016021 GO:0043005 GO:0030672 GO:0015293 GO:0006836 GO:0050896 GO:0006814 GO:0007268 GO:0007601 | |
| InterPro | IPR011701 IPR020846 | |
| Pfam | PF07690 | |
| SUPFAM | SSF103473 | |
| PROSITE | PS50850 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0007601 |
visual perception |
ECO:0000315 |
P |
fig 1 The OMR of blu mutants shows reduced spatial and temporal resolution. |
complete | |||||
|
involved_in |
GO:0007601 |
visual perception |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007601 |
visual perception |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-GENO-980202-849 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0007268 |
chemical synaptic transmission |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-GENO-980202-849 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0098700 |
neurotransmitter loading into synaptic vesicle |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000184252 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0060076 |
excitatory synapse |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1920211 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0050803 |
regulation of synapse structure or activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000184252 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0035249 |
synaptic transmission, glutamatergic |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0031424 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0030672 |
synaptic vesicle membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1920211 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0030285 |
integral component of synaptic vesicle membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000184252 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000184222 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0005326 |
neurotransmitter transporter activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0031424 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0005313 |
L-glutamate transmembrane transporter activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:2156052 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0015813 |
L-glutamate transmembrane transport |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0005313 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0055085 |
transmembrane transport |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0031410 |
cytoplasmic vesicle |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0045202 |
synapse |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006811 |
ion transport |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0015293 |
symporter activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0043005 |
neuron projection |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0030054 |
cell junction |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0050896 |
response to stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007601 |
visual perception |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006814 |
sodium ion transport |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006836 |
neurotransmitter transport |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0030672 |
synaptic vesicle membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Smear, MC et al. (2007) Vesicular glutamate transport at a central synapse limits the acuity of visual perception in zebrafish. Neuron 53 65-77 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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