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DANRE:NGB

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Species (Taxon ID) Danio rerio (Zebrafish) (Brachydanio rerio). (7955)
Gene Name(s) ngb
Protein Name(s) Neuroglobin
External Links
UniProt Q90YJ2
EMBL AJ315610
AL953899
BC059416
RefSeq NP_571928.1
UniGene Dr.82642
ProteinModelPortal Q90YJ2
STRING 7955.ENSDARP00000069992
Ensembl ENSDART00000075510
GeneID 100000711
KEGG dre:100000711
CTD 58157
ZFIN ZDB-GENE-011102-1
eggNOG NOG317570
GeneTree ENSGT00510000048375
HOGENOM HOG000036573
HOVERGEN HBG039321
InParanoid Q90YJ2
OMA GRKHQAV
OrthoDB EOG7JDR08
PhylomeDB Q90YJ2
TreeFam TF333247
NextBio 20784756
PRO PR:Q90YJ2
Proteomes UP000000437
Bgee Q90YJ2
GO GO:0005737
GO:0043204
GO:0020037
GO:0005506
GO:0019825
GO:0005344
GO:0001666
Gene3D 1.10.490.10
InterPro IPR000971
IPR009050
IPR012292
IPR001032
Pfam PF00042
PRINTS PR00188
SUPFAM SSF46458
PROSITE PS01033

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0001666

response to hypoxia

PMID:16709914[1]

IDA: Inferred from Direct Assay

P

Seeded From UniProt

complete

GO:0005344

oxygen transporter activity

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0561

F

Seeded From UniProt

complete

GO:0005506

iron ion binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000971
InterPro:IPR012292

F

Seeded From UniProt

complete

GO:0005737

cytoplasm

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0963

C

Seeded From UniProt

complete

GO:0005737

cytoplasm

GO_REF:0000039

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

GO:0006810

transport

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0813

P

Seeded From UniProt

complete

GO:0015671

oxygen transport

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR012292

P

Seeded From UniProt

complete

GO:0015671

oxygen transport

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0561

P

Seeded From UniProt

complete

GO:0019825

oxygen binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001032

F

Seeded From UniProt

complete

GO:0019825

oxygen binding

PMID:15140880[2]

IDA: Inferred from Direct Assay

F

Seeded From UniProt

complete

GO:0019825

oxygen binding

PMID:16519695[3]

IDA: Inferred from Direct Assay

F

Seeded From UniProt

complete

GO:0020037

heme binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000971
InterPro:IPR001032
InterPro:IPR012292

F

Seeded From UniProt

complete

GO:0043204

perikaryon

GO_REF:0000039

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0197

C

Seeded From UniProt

complete

GO:0046872

metal ion binding

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Roesner, A et al. (2006) Hypoxia induces a complex response of globin expression in zebrafish (Danio rerio). J. Exp. Biol. 209 2129-37 PubMed GONUTS page
  2. Fuchs, C et al. (2004) Zebrafish reveals different and conserved features of vertebrate neuroglobin gene structure, expression pattern, and ligand binding. J. Biol. Chem. 279 24116-22 PubMed GONUTS page
  3. Hundahl, C et al. (2006) Oxygen binding properties of non-mammalian nerve globins. FEBS J. 273 1323-9 PubMed GONUTS page