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CHICK:TAF1B

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) TAF1B
Protein Name(s) TATA box-binding protein-associated factor RNA polymerase I subunit B

RNA polymerase I-specific TBP-associated factor 63 kDa TAFI63 TATA box-binding protein-associated factor 1B TBP-associated factor 1B

External Links
UniProt Q5ZJR9
EMBL AJ720365
AADN02018707
AADN02018708
RefSeq NP_001006416.1
UniGene Gga.4059
STRING 9031.ENSGALP00000026465
PaxDb Q5ZJR9
GeneID 421933
KEGG gga:421933
CTD 9014
eggNOG NOG72502
HOGENOM HOG000124571
HOVERGEN HBG053463
InParanoid Q5ZJR9
KO K15213
Reactome REACT_189490
REACT_189772
REACT_189773
REACT_223091
REACT_248417
NextBio 20824637
PRO PR:Q5ZJR9
Proteomes UP000000539
ExpressionAtlas Q5ZJR9
GO GO:0070062
GO:0070860
GO:0046872
GO:0001164
GO:0001187
GO:0001189
InterPro IPR021752
Pfam PF11781

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0001188

RNA polymerase I preinitiation complex assembly

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q53T94

P

Seeded From UniProt

complete

enables

GO:0001164

RNA polymerase I CORE element sequence-specific DNA binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q53T94

F

Seeded From UniProt

complete

part_of

GO:0070860

RNA polymerase I core factor complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001586581
SGD:S000003562
UniProtKB:Q53T94

C

Seeded From UniProt

complete

involved_in

GO:0042790

nucleolar large rRNA transcription by RNA polymerase I

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001586581
SGD:S000003562

P

Seeded From UniProt

complete

part_of

GO:0005668

RNA polymerase transcription factor SL1 complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0037792
PANTHER:PTN001586581

C

Seeded From UniProt

complete

enables

GO:0001164

RNA polymerase I CORE element sequence-specific DNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001586581
SGD:S000003562
UniProtKB:Q53T94

F

Seeded From UniProt

complete

enables

GO:0001164

RNA polymerase I CORE element sequence-specific DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR033599

F

Seeded From UniProt

complete

involved_in

GO:0001188

RNA polymerase I preinitiation complex assembly

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR033599

P

Seeded From UniProt

complete

involved_in

GO:0006360

transcription by RNA polymerase I

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR033599

P

Seeded From UniProt

complete

part_of

GO:0070860

RNA polymerase I core factor complex

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR033599

C

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539

C

Seeded From UniProt

complete

part_of

GO:0005730

nucleolus

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0188

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page