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CHICK:SRSF1

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) SRSF1 (synonyms: SFRS1)
Protein Name(s) Serine/arginine-rich splicing factor 1

Splicing factor, arginine/serine-rich 1

External Links
UniProt Q5ZML3
EMBL AJ719371
RefSeq NP_001107213.1
UniGene Gga.4490
ProteinModelPortal Q5ZML3
SMR Q5ZML3
PaxDb Q5ZML3
PRIDE Q5ZML3
GeneID 772264
KEGG gga:772264
CTD 6426
eggNOG NOG302520
HOVERGEN HBG002295
InParanoid Q5ZML3
KO K12890
PhylomeDB Q5ZML3
NextBio 20922455
PRO PR:Q5ZML3
Proteomes UP000000539
GO GO:0005634
GO:0003729
GO:0000166
GO:0006397
GO:0048024
GO:0043488
GO:0006355
GO:0006417
GO:0008380
Gene3D 3.30.70.330
InterPro IPR012677
IPR000504
IPR029538
PANTHER PTHR10548:SF87
Pfam PF00076
SMART SM00360
PROSITE PS50102

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0045292

mRNA cis splicing, via spliceosome

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0260944
PANTHER:PTN000567445

P

Seeded From UniProt

complete

part_of

GO:0016607

nuclear speck

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0004587
FB:FBgn0265298
MGI:MGI:98283
MGI:MGI:98284
MGI:MGI:98285
MGI:MGI:98287
PANTHER:PTN000567445
RGD:1359422
TAIR:locus:2024770
TAIR:locus:2035651
TAIR:locus:2049766
TAIR:locus:2079502
TAIR:locus:2086804
TAIR:locus:2099931
TAIR:locus:2124799
TAIR:locus:2131864
TAIR:locus:2144945
TAIR:locus:2173338
TAIR:locus:2199837
UniProtKB:O75494
UniProtKB:P84103
UniProtKB:Q01130
UniProtKB:Q07955
UniProtKB:Q08170
UniProtKB:Q13247
UniProtKB:Q96PK6
UniProtKB:Q9BRL6
UniProtKB:Q9BWF3

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0004587
FB:FBgn0011305
FB:FBgn0011640
FB:FBgn0028554
FB:FBgn0260944
FB:FBgn0265298
FB:FBgn0283477
MGI:MGI:1100865
MGI:MGI:1333805
MGI:MGI:1921361
MGI:MGI:98283
MGI:MGI:98284
MGI:MGI:98285
MGI:MGI:98287
PANTHER:PTN000567445
PomBase:SPBC11C11.08
RGD:1309233
RGD:1359241
RGD:1359422
RGD:1561347
RGD:1587490
RGD:3664
TAIR:locus:2024770
TAIR:locus:2035651
TAIR:locus:2046638
TAIR:locus:2049766
TAIR:locus:2079502
TAIR:locus:2086804
TAIR:locus:2099931
TAIR:locus:2114643
TAIR:locus:2117706
TAIR:locus:2119797
TAIR:locus:2122990
TAIR:locus:2124799
TAIR:locus:2131864
TAIR:locus:2144945
TAIR:locus:2173088
TAIR:locus:2173338
TAIR:locus:2199837
UniProtKB:O75494
UniProtKB:P84103
UniProtKB:Q01130
UniProtKB:Q07955
UniProtKB:Q08170
UniProtKB:Q13242
UniProtKB:Q13243
UniProtKB:Q13247
UniProtKB:Q16629
UniProtKB:Q8I3T5
UniProtKB:Q8I468
UniProtKB:Q96PK6
UniProtKB:Q9BQ04
UniProtKB:Q9BRL6
UniProtKB:Q9BWF3
UniProtKB:Q9Y4C8
WB:WBGene00004315
WB:WBGene00004699
WB:WBGene00004701
WB:WBGene00004703

C

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0011640
PANTHER:PTN000567445
RGD:3664
SGD:S000001016
UniProtKB:O75494
UniProtKB:P84103
UniProtKB:Q07955
UniProtKB:Q13247
UniProtKB:Q9BWF3

F

Seeded From UniProt

complete

involved_in

GO:0000381

regulation of alternative mRNA splicing, via spliceosome

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0004587
FB:FBgn0011305
FB:FBgn0028554
FB:FBgn0030479
FB:FBgn0260944
FB:FBgn0265298
FB:FBgn0283477
MGI:MGI:1100865
MGI:MGI:98284
PANTHER:PTN000567445
UniProtKB:P0DJD3
UniProtKB:Q13247
UniProtKB:Q8WXF0
UniProtKB:Q9BWF3

P

Seeded From UniProt

complete

enables

GO:0003676

nucleic acid binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000504
InterPro:IPR035979

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR034520

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

involved_in

GO:0006397

mRNA processing

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0507

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539

C

Seeded From UniProt

complete

involved_in

GO:0008380

RNA splicing

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0508

P

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0694

F

Seeded From UniProt

complete

part_of

GO:0016607

nuclear speck

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0186

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page