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CHICK:SOX14
Contents
| Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
| Gene Name(s) | SOX14 | |
| Protein Name(s) | Transcription factor SOX-14
SRY-related protein CH60 | |
| External Links | ||
| UniProt | Q9W7R6 | |
| EMBL | AB026622 AF193760 M86326 | |
| PIR | I50196 | |
| RefSeq | NP_990092.1 | |
| UniGene | Gga.286 | |
| ProteinModelPortal | Q9W7R6 | |
| SMR | Q9W7R6 | |
| GeneID | 395526 | |
| KEGG | gga:395526 | |
| CTD | 8403 | |
| eggNOG | NOG302715 | |
| HOGENOM | HOG000231647 | |
| HOVERGEN | HBG105618 | |
| InParanoid | Q9W7R6 | |
| KO | K09267 | |
| PhylomeDB | Q9W7R6 | |
| NextBio | 20815603 | |
| PRO | PR:Q9W7R6 | |
| Proteomes | UP000000539 | |
| GO | GO:0005634 GO:0043565 GO:0000122 GO:0045892 GO:0006351 | |
| Gene3D | 1.10.30.10 | |
| InterPro | IPR009071 IPR029549 IPR022097 | |
| PANTHER | PTHR10270:SF107 | |
| Pfam | PF00505 PF12336 | |
| SMART | SM00398 | |
| SUPFAM | SSF47095 | |
| PROSITE | PS50118 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0045892 |
negative regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000305 |
curator inference used in manual assertion |
GO:0043565 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000122 |
negative regulation of transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0044798 |
nuclear transcription factor complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:103559 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0030154 |
cell differentiation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:98363 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:103559 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0000411 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:103559 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000122 |
negative regulation of transcription by RNA polymerase II |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000030611 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:2001222 |
regulation of neuron migration |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q04892 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0046982 |
protein heterodimerization activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q04892 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0044798 |
nuclear transcription factor complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q04892 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009649 |
entrainment of circadian clock |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q04892 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0007601 |
visual perception |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q04892 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003682 |
chromatin binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q04892 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q04892 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Uchikawa, M et al. (1999) Two distinct subgroups of Group B Sox genes for transcriptional activators and repressors: their expression during embryonic organogenesis of the chicken. Mech. Dev. 84 103-20 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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