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CHICK:RS13

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) RPS13
Protein Name(s) 40S ribosomal protein S13
External Links
UniProt Q6ITC7
EMBL AY626809
RefSeq NP_001001783.1
UniGene Gga.12646
ProteinModelPortal Q6ITC7
SMR Q6ITC7
STRING 9031.ENSGALP00000009821
PaxDb Q6ITC7
PRIDE Q6ITC7
Ensembl ENSGALT00000009835
GeneID 414782
KEGG gga:414782
CTD 6207
eggNOG COG0184
GeneTree ENSGT00390000017491
HOGENOM HOG000180723
HOVERGEN HBG000938
InParanoid Q6ITC7
KO K02953
OMA WHLVKKA
OrthoDB EOG7KH9MB
PhylomeDB Q6ITC7
TreeFam TF300190
Reactome REACT_189501
REACT_194766
REACT_197241
REACT_197242
REACT_198213
REACT_204526
REACT_217879
REACT_221558
REACT_241003
REACT_257977
NextBio 20818719
PRO PR:Q6ITC7
Proteomes UP000000539
GO GO:0022627
GO:0070062
GO:0016020
GO:0005730
GO:0003729
GO:0003735
GO:0033119
GO:0006412
HAMAP MF_01343_A
InterPro IPR012606
IPR000589
IPR023029
IPR009068
Pfam PF08069
PF00312
SUPFAM SSF47060
PROSITE PS00362

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0070181

small ribosomal subunit rRNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000223267
SGD:S000002471

F

Seeded From UniProt

complete

part_of

GO:0022627

cytosolic small ribosomal subunit

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000223267
RGD:621027
SGD:S000002471
TAIR:locus:2101901
TAIR:locus:2126936
UniProtKB:P62277
UniProtKB:Q8IDB0

C

Seeded From UniProt

complete

part_of

GO:0005730

nucleolus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0010265
PANTHER:PTN000223268
TAIR:locus:2101901
TAIR:locus:2126936
UniProtKB:P62277

C

Seeded From UniProt

complete

enables

GO:0003735

structural constituent of ribosome

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000223267
SGD:S000002471
UniProtKB:Q8IDB0

F

Seeded From UniProt

complete

enables

GO:0048027

mRNA 5'-UTR binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62277
ensembl:ENSP00000435777

F

Seeded From UniProt

complete

involved_in

GO:0033119

negative regulation of RNA splicing

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62277
ensembl:ENSP00000435777

P

Seeded From UniProt

complete

part_of

GO:0022627

cytosolic small ribosomal subunit

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62277
ensembl:ENSP00000435777

C

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62277
ensembl:ENSP00000435777

C

Seeded From UniProt

complete

part_of

GO:0005730

nucleolus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62277
ensembl:ENSP00000435777

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62277
ensembl:ENSP00000435777

C

Seeded From UniProt

complete

enables

GO:0003729

mRNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62277
ensembl:ENSP00000435777

F

Seeded From UniProt

complete

enables

GO:0003735

structural constituent of ribosome

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000589
InterPro:IPR012606

F

Seeded From UniProt

complete

part_of

GO:0005840

ribosome

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000589
InterPro:IPR012606

C

Seeded From UniProt

complete

involved_in

GO:0006412

translation

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000589
InterPro:IPR012606

P

Seeded From UniProt

complete

part_of

GO:0005840

ribosome

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0689

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page